| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28392 |
|---|
| Symbol | POL5.5 |
|---|
| ID | 4851169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 1101228 |
|---|
| End bp | 1103089 |
|---|
| Gene Length | 1862 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | |
|---|
| GC content | 41% |
|---|
| IMG OID | 640392877 |
|---|
| Product | putative RNA-directed DNA polymerase |
|---|
| Protein accession | XP_001387439 |
|---|
| Protein GI | 126274155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.97685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAATC ATATGGCCCT TACCAACCTA TTGAACCTAG AAGTGCAAGG TCACATCACG
GTTGACGACA CCGAGTCAAG TAAGAATCTT GTGAAGAATT GTATAACCTG CAACAGTATT
ACTGTCAGAC AATCATCACA CAATCATCAC ACTCAACGCG CCGCTGTGCG CAGACTTGAA
CGTGTGAGTT GCGATACTAT CGGACCTTTC CAATTTAGGA GATACAATAA GTCTACTGCA
AAAATATTTA TCACTTCCGT TATTGATCAT TACACCGGTT ACACCAAACT ATTATATACT
GATCACAAGT CTCTTGCAGA CACAGTATTA AATACTCTTA ATTTATGGAA TCATAAATTT
CCTGGTGAAT CGATTTCATA TTTCCGGTCG GATAATGCAA TAGAACTTCC TTCTGACGAA
CAACTACTTA AACTTGGAAT CGAACGCGAT CAAATTCCAC CGTATTCTCC AGAGCTAAAT
GGATTGGCAG AATCACATAA TCGCATTATT CTTGCCAATA TACGGAAAGT TGTACTAAGT
TTCCCCGATC GCCACGATGA AGTATTGACT CTCTTCAAAG AAATCGTGGA ATACTCGGCA
TTCGTCAAGA ACAATACTCC CCGAAAGCTG CTCCAATATC GCACACCTGC CGCCGTCTTT
TTTAACTATA AAGACGCATA TCACCGTCCT ATTGTCCCAT TCGGTATGGA CGTTGTGATA
AAAGCATCTT CGAAAGAAGA ATACGAGAAG TATGGCCGTC CCTTACTTAA GACTGAACCA
CACGCTTTCT TCGGTTCTAT CGTCGGCTTC GCCACAGATA ACTATAGCTA CCGAATACTC
GTCCAAGCAG AACATTTCCC AATTATAACG AATTGTAATG CAAAACTCCT CAATTCACGC
CAATTTATCG AGAATTATTT TCAATCACTT GATTTGTTAC AGAGAGACAG CGCTCAATAT
AATGCCACAG TACTCGATGC ACTTGAAGAC AAACTTGCTG ATCATATCGA TATCGCTGAT
AAAGAGGTTA TCTTTGATGC TACTTTACTT AAAAACGGGG ACACATCTGT CCAGACAGCC
AACATTGGAG ACACCAATTT ATCGACGCCA TCTCCTCAAA ATCCTGAGGC TTTGAGCAAT
ACACCTTCTT CGCAGATGAC GATCGAAAGT CTTTCTACAA GACATCCCGA AGTAGCCACT
CAACACAAAC GGCGTATAGA AGAACTCACT TCTGACACGT TACCATTTCC TACCGATCAA
GAAGGTAATT CGGTAGACGG AAAGCACATT AAGCGCTCAC CACGATTAGG GGGAGTAAAA
ACAACTCCAC TTTCAGCCAC TAGAACGATC AGGGACCATA AGACTAAAAG TAAAATTGTT
GATAACAATC GTGATTACGC TGCTGACCCC ATTAAAACTG CTATAGAAGA AACCAGAACG
AAAATGAGTG AAGATCATAA CTTAAACTCA ACTACGACAA ATTCTGAAGA GTTAACTTCA
CAGTTAGCCT CCCAGGAGGA TAGAATCTCA GGGGAGTTAT CAGGGGAAAC AAATGTGGAC
TTATCAACCA CACCAGCACA AAATACAAGA TCACATACCA AGTCAAGACT AGACAAACAA
ATTGAGCTGT CTAAAAATTG GTCTAACCTA GATACGCGAA AGACTCAATC ATGGAATAAA
GTCCCACCTG AAATACACGG AAAGGGCAAA ATTAGTAAGA GGAAAGGTAC CAAAGCATCA
TTATTGGACA AGGATGCACA AAGCTCACAA ATAGCAAAAA CGATCACCTC CGAAATAATA
AAAAGAAAGA AGAAGACACC AGATTTCGAT TCCAGTCCAC AACAGATAAA TGCATTGCTT
AG
|
|---|
| Protein sequence | MYNHMALTNL LNLEVQGHIT VDDTESILLS DNHHTIITLN APLCADLNVF PDRHDEVLTL
FKEIVEYSAF VKNNTPRKLL QYRTPAAVFF NYKDAYHRPI VPFGMDVVIK ASSKEEYEKY
GRPLLKTEPH AFFGSIVGFA TDNYSYRILV QAEHFPIITN CNAKLLNSRQ FIENYFQSLD
LLQRDSAQYN ATVLDALEDK LADHIDIADK EVIFDATLLK NGDTSVQTAN IGDTNLSTPS
PQNPEALSNT PSSQMTIESL STRHPEVATQ HKRRIEELTS DTLPFPTDQE GNSVDGKHIK
RSPRLGGVKT TPLSATRTIR DHKTKSKIVD NNRDYAADPI KTAIEETRTK MSEDHNLNST
TTNSEELTSQ LASQEDRISG ELSGETNVDL STTPAQNTRS HTKSRLDKQI ELSKNWSNLD
TRKTQSWNKV PPEIHGKGKI RCTKLTNSKN DHLRNNKKKE EDTRFRFQST TDKCIA
|
|---|
| |