Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28388 |
Symbol | |
ID | 4851165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 1096265 |
End bp | 1096903 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | |
GC content | 46% |
IMG OID | 640392873 |
Product | conserved hypothetical protein |
Protein accession | XP_001387856 |
Protein GI | 126274151 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.706106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCA TACTAACGTA TACTTCGACG CGGAGAATAC AGCCGTATTT ACTTTGCTTT TCTAGAAATT CCTTTTCTGG TCAATTTTTC ACTTGCCGTA CTTTTTTCCA GACTCCAGTA CCACGAAACT CGAGTTCCAT TAGCGACGAA TTCTCAAAAG ATGATATCGA CAAAGCAAAG GCATGGCTCC AAAGCTTCAC GGTCGAACAG ATACCGACAC ATATATTTGA TATATCCTAT AGCCGATCGT CAGGAGCTGG TGGGCAGAAA GTCAACAAGA CTTCCTCGAA GGCTACTGTC GCACTAGAGC CATCGCAATG GCTTGATCCC CAGTACTGCT ATTGGATTCC GTTACCGGTA CGACGCCAAA TCTCGGCAAA GAAGATTCGG TACGAGACAA AGAAGGGAGG GATACTTATT CAGAGTGACA CTACGAGAAA CAGGGACGTG AACACGGATG AGTGCTTCCG CAAGTTGCTC CAGGAAATCA AAGACACAAC ATTTTTCGCA GGCGAGGTAA GTGAAGAAGA CAAGAAGCGA TGGGAAGAAA TCCGTGAGGA CGCCAAGGAG AAGCGGATGT TCAACAAGAA GAAGCAGAGC GATAAGAAGA AGAGTCGACA GAAGAAGTTC GACTGGTAG
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Protein sequence | MASILTYTST RRIQPYLLCF SRNSFSGQFF TCRTFFQTPV PRNSSSISDE FSKDDIDKAK AWLQSFTVEQ IPTHIFDISY SRSSGAGGQK VNKTSSKATV ALEPSQWLDP QYCYWIPLPV RRQISAKKIR YETKKGGILI QSDTTRNRDV NTDECFRKLL QEIKDTTFFA GEVSEEDKKR WEEIREDAKE KRMFNKKKQS DKKKSRQKKF DW
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