Gene PICST_28388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28388 
Symbol 
ID4851165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1096265 
End bp1096903 
Gene Length639 bp 
Protein Length212 aa 
Translation table 
GC content46% 
IMG OID640392873 
Productconserved hypothetical protein 
Protein accessionXP_001387856 
Protein GI126274151 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.706106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA TACTAACGTA TACTTCGACG CGGAGAATAC AGCCGTATTT ACTTTGCTTT 
TCTAGAAATT CCTTTTCTGG TCAATTTTTC ACTTGCCGTA CTTTTTTCCA GACTCCAGTA
CCACGAAACT CGAGTTCCAT TAGCGACGAA TTCTCAAAAG ATGATATCGA CAAAGCAAAG
GCATGGCTCC AAAGCTTCAC GGTCGAACAG ATACCGACAC ATATATTTGA TATATCCTAT
AGCCGATCGT CAGGAGCTGG TGGGCAGAAA GTCAACAAGA CTTCCTCGAA GGCTACTGTC
GCACTAGAGC CATCGCAATG GCTTGATCCC CAGTACTGCT ATTGGATTCC GTTACCGGTA
CGACGCCAAA TCTCGGCAAA GAAGATTCGG TACGAGACAA AGAAGGGAGG GATACTTATT
CAGAGTGACA CTACGAGAAA CAGGGACGTG AACACGGATG AGTGCTTCCG CAAGTTGCTC
CAGGAAATCA AAGACACAAC ATTTTTCGCA GGCGAGGTAA GTGAAGAAGA CAAGAAGCGA
TGGGAAGAAA TCCGTGAGGA CGCCAAGGAG AAGCGGATGT TCAACAAGAA GAAGCAGAGC
GATAAGAAGA AGAGTCGACA GAAGAAGTTC GACTGGTAG
 
Protein sequence
MASILTYTST RRIQPYLLCF SRNSFSGQFF TCRTFFQTPV PRNSSSISDE FSKDDIDKAK 
AWLQSFTVEQ IPTHIFDISY SRSSGAGGQK VNKTSSKATV ALEPSQWLDP QYCYWIPLPV
RRQISAKKIR YETKKGGILI QSDTTRNRDV NTDECFRKLL QEIKDTTFFA GEVSEEDKKR
WEEIREDAKE KRMFNKKKQS DKKKSRQKKF DW