| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28363 |
|---|
| Symbol | RSC9 |
|---|
| ID | 4851140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 1028794 |
|---|
| End bp | 1030587 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640392848 |
|---|
| Product | chromatin remodeling protein |
|---|
| Protein accession | XP_001387841 |
|---|
| Protein GI | 126274126 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.118968 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCTA TTGGTTATAA TCACCGGGGA ATCGATGACA CGGCTCGGAT AATCATGTCG
TTGAAGTCTG GTATCGATTC AGAGATCAAA TGGGCGCTTT CGACTTTGAC TCGTGTTTCC
TTACACCCTA CTTTCAGTCT AGAAGCCATT CCCTACTTTG GCCACGAATT GATTAAATAC
TTCATAAAGC CATACCAGTT GATTTTAGAG AAGAAGCCTC ATAAGGTCAG CGATGAAATC
ATGGCCATGA GTTTGGACTC GTTGCTTACC TTGCGTAATC TGGCACAAGA CTTGCCCAAC
CAGCAATGGT TAGCACAAGT GAAACCGCTT AAAAAGTCTC TTGTGGAAGT GCTGAAGTTT
TTGTTTAACT GGTTTTATCA TGATGATGTT CAGTCATACC ATTTGATTCG TTTAGACAAC
CAGTTCAAGG AAGCGTTGAC GTATTTGGTG GACTTGTTGG AACCGTTATC CTGCTACTAT
ATCGACAATT CCAAGCACGA TCCATTGTTC AATACCTTGT TATCAGCTGC TGTTTTAACC
AGAGACAAGA CTCAGCTTAT CAGCCTCTTG AAGTGTTTAT CACATTTGTT GATTATCAGA
GACAGAGCTT TTGTGCAAGA TCTGAACGGA AATCTGGAAC AGGAAGAGTC CCGTGAAGAT
GAGAGAAAAA TGATAAACTG CATCGATGCA ATTACAGAGT CTCAACTAGA ACATATTGTA
AATCAGTTAC TTATAAATGA CGGCGAGTTG AACTATGCCG TATTGGAATT CCTCAAGCTG
TACCTCTTCT CTGAAGCCAC AACAGCTGAG TCTCCCAACT CTATTAGAGA CTCACAATCA
CGTAGATTGC AACGTTTACT TCAGTTGAAC TCGTCCAAAT CTGGTTTCAA CACTTTGGTC
AAACAGTTGC CACTTTTGAT CGTTTCCAAC TTGCCGTTAA ACGATCCTAC AAACGTAAAG
TCTATTGCAC AGCTCAACTT GACGAAAAGA TCGCAGTTCT CTGGAGTTCC CTCTTCTTTA
CCACAGCTCA CAGAAGACTT GTACAGTCTC ATCGTTCGTT TCCCCGAACC CTTGAGAGCC
ACCACCTGGT TGCGTTGCTG CTACGAGCCC TATGCACACA ACAACCTCAT CAGTACCGCC
GGCACCGACG CTACAACAGA CGTAATTCCT GGCGAAGTGA CTCAAATTTC GTTGTGGAAA
GCATATGAAA ACCAGTTCCA GGAAATCTGG GATCCATCCA ATGGTGAAAG TAATCCAGAT
TTGAAGCCAT TGTTGCCAGC TGTAGACTTC ATCAAGAACG TTTCACATGC CTTTCCCAAC
TCGGAAGCCA TGGTGGTAAA CCTAGACTCT GTAGAAGGCG AAGCCCCTAA AAAGAAATTC
ATTATCAAAG GTATTCAACC AAGACAGTTT GCCGTGAATA TAGATATCGG AAACTACGAT
GCCTTGAAAC CCATTCCTGT TTCCTCTGTG AATCCAGAGG AGAACTATAA ATTACCTATT
GGACACATAG ACATGGAGAA GTTTGCTCAC ACCATCAACA GAGTCTCTGA AGAGATCTTG
TCTGAAGGTT CAAGAGTCAG CCGTAGCCTG GAAGCCGTCA ACCTGATCAA CTTGTCCAGT
TATGACTTGT TGGACTATAT AATCAATGAA GTTTTGGAAT CAAAGGAGAA CTCAATCGAA
GAGAATACCT TCAGATTGTA CAACAGTCAT TGGCTTCCTG ACTTAGTATA TGCAAACCCT
TCATTGCTTG AAAATGGTTT GATCAACAGC AGCTGGTTGA AGTACTTGAT TTAA
|
|---|
| Protein sequence | MAPIGYNHRG IDDTARIIMS LKSGIDSEIK WALSTLTRVS LHPTFSLEAI PYFGHELIKY
FIKPYQLILE KKPHKVSDEI MAMSLDSLLT LRNLAQDLPN QQWLAQVKPL KKSLVEVLKF
LFNWFYHDDV QSYHLIRLDN QFKEALTYLV DLLEPLSCYY IDNSKHDPLF NTLLSAAVLT
RDKTQLISLL KCLSHLLIIR DRAFVQDLNG NLEQEESRED ERKMINCIDA ITESQLEHIV
NQLLINDGEL NYAVLEFLKL YLFSEATTAE SPNSIRDSQS RRLQRLLQLN SSKSGFNTLV
KQLPLLIVSN LPLNDPTNVK SIAQLNLTKR SQFSGVPSSL PQLTEDLYSL IVRFPEPLRA
TTWLRCCYEP YAHNNLISTA GTDATTDVIP GEVTQISLWK AYENQFQEIW DPSNGESNPD
LKPLLPAVDF IKNVSHAFPN SEAMVVNLDS VEGEAPKKKF IIKGIQPRQF AVNIDIGNYD
ALKPIPVSSV NPEENYKLPI GHIDMEKFAH TINRVSEEIL SEGSRVSRSL EAVNLINLSS
YDLLDYIINE VLESKENSIE ENTFRLYNSH WLPDLVYANP SLLENGLINS SWLKYLI
|
|---|
| |