| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28358 |
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| Symbol | PRN1 |
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| ID | 4851135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1021727 |
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| End bp | 1022746 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392843 |
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| Product | RNA pol II transcription cofactor |
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| Protein accession | XP_001387838 |
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| Protein GI | 126274121 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.155514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCA CCACTGCTAG AACTGTCAAG CAAATTGTCA ACGCCGTTCA GAGACCTGAA
GGTGTTGGAG CTACAGTTAG AAGATCCATC GGTATTATGG GATCGAGAAA CTTCAACCCT
TTCTTGATGT TCGACCATTT TTCGAGCGCT GGTACCAATG GTTTCCCCGA ACATCCTCAC
AAGGGTCAAG AAACTATCAC CTTAATTTTG AAAGGCGCTA TGGCCCATGA AGACTTTACC
GGCTCCAAGG GTATCCTTTA CGGAGGAGAC TTACAATTTA TGACTGCTGG TAAGGGTGTC
GTTCACTCTG AAATGCCTGT TCCAAACGAA GACGGTTCCC CTACTGTAGG CTTGCAATTG
TGGGTTGATT TGCCAGAAAG CTTGAAAGAT GCAAAGCCTC GTTACAGAGA TTTGAGATCT
TGGGAAATTC CTGAAGTTGT TGAACAAGAC GGCAAATTGA GAATAAAGGT TATTTCTGGT
AAGAGTTACG GTGTAGAATC GGTCAAGGAC TTGGCCTACA CCCCTGTTCA TTACTACTAC
TACAGAATGA AGGCAGGTGC CACTTTCAAG CAAGAGCTTC CTAAGGACTT CAACTTCTTC
TTGTACGTAT TGAGCGGTAA CGACTTGGTT CTTAACGGCG ATACCAAGGT TAAGGAATTC
AACAACGTAT TCTTAAACAG CGATGGTGAC TTTATCACTG GTGAAAACGT ATCCAAGTCA
ACTAATGAAG ACGAAGAAGT TGAGTTCGTC TTAATTGGTG GCCAGCAATT GGACCAAAAA
GTAGTGCAAT ATGGCCCATT TGTGTCCACA ACCAAGGAAG GTATCGAAAA AGCCTTTGTC
GACTACAACT ACGCCCGAAA CGGCTTTGAA AACGTCAAGA CCTGGAGGAC TTTGATCAGT
AACGGTGTGA CCAAGGAAAT GATAGAAGGT CCATTGAACG GTAACCTTGA AAAGAGAGAA
CAGGCAAGAT TAGCGTACTT AGCCAAGCAA AAGACGACTC CTGAAAAGGA CGAACTTTAG
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| Protein sequence | MSSTTARTVK QIVNAVQRPE GVGATVRRSI GIMGSRNFNP FLMFDHFSSA GTNGFPEHPH
KGQETITLIL KGAMAHEDFT GSKGILYGGD LQFMTAGKGV VHSEMPVPNE DGSPTVGLQL
WVDLPESLKD AKPRYRDLRS WEIPEVVEQD GKLRIKVISG KSYGVESVKD LAYTPVHYYY
YRMKAGATFK QELPKDFNFF LYVLSGNDLV LNGDTKVKEF NNVFLNSDGD FITGENVSKS
TNEDEEVEFV LIGGQQLDQK VVQYGPFVST TKEGIEKAFV DYNYARNGFE NVKTWRTLIS
NGVTKEMIEG PLNGNLEKRE QARLAYLAKQ KTTPEKDEL
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