Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28349 |
Symbol | |
ID | 4851126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 993696 |
End bp | 994910 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | |
GC content | 44% |
IMG OID | 640392834 |
Product | hypothetical protein |
Protein accession | XP_001387831 |
Protein GI | 126274112 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTAG CCGTGCCCAT GGCTATACCT GTAGAAGATG CTATTTTCGA CATATCCGAA TATTGGGAAG AGTTCATGGA CAACAGTCTC AGCTACGACC AAATAGACAC ATATTACGAA CTTCTCGACT CCTCCAACGA GCTCTCCAAG AGAGACGTTC AGACTATTGC TGGACTCTTG GAATTGCTCA ACAGATCAGA GATCATCTGG GACGTTTTGG ACCAAGTAGC TGGCCATCCT GACAGAATTC AGACCCTTGC CAATCTCACC AGTGGTTTGA TCGATTTCAT TGGTGCTTCC AACATCAGTC TTGCTGATTT AACGAGTGCT GCTTCGTCGC TCAGCGGTTC TGTTAATGTT ACCGCCATTG TCGGTGCTGT TCTTGATTCT GGAGTCGTCA CCAACTTGTT GGACGGAATT CTCTTAGATG ACAGTTTCAG ACCCGTTTTG GTGAACTTGA TTAACGACGT TGTTCTATCG TTTAAGACTG AGATTTGGTT CCTTCTCAAG GGTGTATTTG CCAAGAGAGA GTACTTGGAA CCAATGTCTC AAGAAGAAAT CATCGAAGTG TTCAGAAGAG CTTCCAACGA GGGATCTCTT GAAACCTTTG CTAGCAACGT TGTGGGCACT ATTCTTGAAT CACAATTGGT TAAAAACATC TCGTTGGACT TGCTTGCTGC CTTGAATGAA ACAAGCTTCT TGACTTACAC CGTTAAGAGA TTCCTTGCCA CCCCAGCCTA TATCAACATG ACAACTGATT TGATATCTGA CATTTACAAC ACTGCACACA TCAATATTGA TCTTAGCTCC ATTAACATCA GTGCAATTGT AGGTTCTGCC TTGGCTAACC CTAAGTTAAT TAGCAATGCT GTTGGTCTGC TCTTGTCAGG AAATTTGGAT CTCAGCTTCT TAGGAAAGTA TGCCTCGGCT GTGAGTAAGA TCATTACTGG CTTAGAGGAT AAGGGTCTCT TCCAGGAATT GAACGACTTC ATCTTCCCTT CTACGAGTAA ATCTGCTACT GCTACAACTT CGGAGAAAAA CAAAGATCAA GTTGTTACTG GAAGCACTTC TGCAACTACT ACTCAATCTA AGTCCAGTTC TACGGCAACG AATGGAGCTC CATCCGTGGC AGGAAGCCGC TTGAGCAATC CCATGATCAA AATGATTTTC TTTTTGCAAT CACTTGCTTT CGGTGGAGTC TTGTTGATTC TCTAA
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Protein sequence | MAVAVPMAIP VEDAIFDISE YWEEFMDNSL SYDQIDTYYE LLDSSNELSK RDVQTIAGLL ELLNRSEIIW DVLDQVAGHP DRIQTLANLT SGLIDFIGAS NISLADLTSA ASSLSGSVNV TAIVGAVLDS GVVTNLLDGI LLDDSFRPVL VNLINDVVLS FKTEIWFLLK GVFAKREYLE PMSQEEIIEV FRRASNEGSL ETFASNVVGT ILESQLVKNI SLDLLAALNE TSFLTYTVKR FLATPAYINM TTDLISDIYN TAHINIDLSS INISAIVGSA LANPKLISNA VGLLLSGNLD LSFLGKYASA VSKIITGLED KGLFQELNDF IFPSTSKSAT ATTSEKNKDQ VVTGSTSATT TQSKSSSTAT NGAPSVAGSR LSNPMIKMIF FLQSLAFGGV LLIL
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