| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28344 |
|---|
| Symbol | |
|---|
| ID | 4851121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 981115 |
|---|
| End bp | 981816 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640392829 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001387828 |
|---|
| Protein GI | 126274107 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.872469 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCGC AGATTACGTT TGTAAAAGTA TCCCTGAGGG TGTTGCCCGT TAAGGTGTTC
GTAAGTAAAG CTGGCGTGGG TTCTCTGAGC AACAGCAGGT CATCACTAGC TATCAACGAA
ACGTCCCTTA TTACACTCAA CAACAGGCTG AACTATTTTC ACATACGACT TTCCAATAAC
TTCTTGAACC AGTTGGTCAA CGTACAGTTG AACGAGGTGT TGCTCTCTGT ATTGTTAAAA
GCTCCGCTAC GGGAGCTTGT AGAGAATAGA GATGATACGT GGGTCAAATT GAGACAAACG
ACTCTGGACG ATAAAAAGCT CAAATTTCGG TTAGAGGTGC CTGTTCACTT GATAGTACGC
CTACGTCTAG AGCTCGACAA GTTGACTATA GACGATATCG AGTTTGTGAA TTCGGGCAAG
TTTAAGCTAG AGAACATCCT AAAGGAGAAA AATAGTCGGG CGGACAACTC GTTATTACTT
ATGACGAAAA GAAATGTGTT TAACAACAGA AGCTTCCTGG AAGAGCCAAC CATACTAGTA
GAGGAAGATG AGAGTCTAGG TCTTTCTGAA GGATCCGAAG TTGAAAAAGA GAATACAGAC
AAGCATCTGG ATGATAAGAA GTCTGTCAGC TACAAGGTCA ATGGGCTTCG TATGTTCAAC
AATACCCAGA ATTGCATGAA GCTATACATG ATAGGTACTT AA
|
|---|
| Protein sequence | MPPQITFVKV SLRVLPVKVF LVNVQLNEVL LSVLLKAPLR ELVENRDDTW VKLRQTTLDD
KKLKFRLEVP VHLIVRLRLE LDKLTIDDIE FVNSGKFKLE NILKEKNSRA DNSLLLMTKR
NVFNNRSFLE EPTILVEEDE SLGLSEGSEV EKENTDKHLD DKKSVSYKVN GLRMFNNTQN
CMKLYMIGT
|
|---|
| |