Gene PICST_28329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28329 
SymbolMDM34 
ID4851106 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp946981 
End bp948777 
Gene Length1797 bp 
Protein Length523 aa 
Translation table 
GC content39% 
IMG OID640392814 
Productmitochondrial outer membrane protein involved in mitochondrial shape 
Protein accessionXP_001387416 
Protein GI126274092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.863481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.640618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA AAGTCAACTG GAAATCACTC GAGACCGACT CGTTGACATC TTGGACGAAA 
GATCTCTTGA CTAGTGCATT GAATCTGGGG AAAAGTCCTA ATATTCTTGC CTCAAGTATC
CTGATTAAGG ATTTGAACTT TGGCAAAATT GCTCCCAACT TTGAGATTTT GGAGATTGGT
GAGTTGGGCA GAGACAGATT CAGAGGCATT TTCAAGATTA ACTACGAAGG AGACTTCCAC
TTGACGCTCC ATACAAATGT TCAGGCAAAT CCGTTGAATA TCTACTACTC TAATTCCATG
GAAAAGGAGA TAGATAGCCA GTTTGTTACA CCTAACTTTT TACTTTCAAA TGAGCAGTTT
GCTTTGCCTT TGGATTTGAA ACTTAGCGAT ATAAAAATCA GCGGTATCGG CATTATTGTG
TTTTCCAAGC TGAAGGGATT GACGTTGGTG TTCAGAAATG ATCCATTAGA TTCCATTAAA
GTCTCTTCTA CATTTGATAC AGTTCAGGTA TTGGCCAATT TCCTTCAGAA ACAGATCGAA
ACCCAGATCA GAGATTTGTT CAGAGAAACG TTGCCCACTT TGATACATCA ATTTTCGCTC
AAGTATCTCA GTCTCGATAA CAATTCAGAT GATTTACATG CTCATTTTGC ATCTTCGTCC
AGAACTCACT CTTCAGCTTT GGATCCAGAC AACGAGTTCA ACAATTTTAC ATATTCGTCA
AAGAATTTAC AGAAGAACTT GCAATTGTTT AATACTAGAG AAACATTGGA TTTGCACATT
CCCAAGTTTA AGGGTATAAT ACAGAGATCG CATTTGGAGA AGTTTACCCA GAACTACCCT
AGTTTGTTGA ACTCATTGTA TTTGAACTTG CACGAGATCG ATATGAAGTC CTACAATACA
TATAACAACA ATACTGGATC CAATGGTATC CCCATTGACT TGTTGATTAA CGATAAGAAC
TTCAACAGAA CCAATAGAGT CTTGAAAGAG ATATCGGACA TTCAATCTAA CAGCTTCTAC
AAACAGAGCA ATAACAATAA GGACACCACT GTTAAGCCCA AAAGAAGAAG AATCAAGTAT
AGCACCAGAA AGAAGGCAGC TTCGCCTGTT TCTGCAATTG ATACCGCTGC TCTTACTGGT
TGTAATTTGT CTTCTATGGA TGTTAGCCAC GCTACGTCTA TTGAGCTTGC ACATGACATG
TCTATACAAT CAGAGACTTC TACTTTGATC AACGATGACT TCCACATGGC GTCGTTACAT
TCTTCAGTAG CTTCCTCAAT GCCTATGTCA ATGTCGTCTT CTCTTTCCGA TTCTGAAGAA
AGACCTCAGT TGTTAGCTCA ACCTAGACCT ATGAGAATAT CACCAGATTT TTACCAAGCG
TTCTTGAAGA GTACTCCTGG TCATTACCAG CCTTTATTTG AGAACAATGC TGGTATCAAT
GTAAACGGTA ATATTGGCAA TAATGGCAAT AATCCTACTA TTAGCAATAT TGGTAACGTT
AATGCCAATG TTAACAATAC TAATTCATCA TTATTATCAA GCGTTGGTTT GGGAACAAAT
TACTTCAATT TTGCAACGAG CCAACCAATT CTGACGTCTC CCATTAAGAA GGACCCGGCC
AGAGATTTCA TCAAAGAAAA GAAGTCCATC AACTATATTG ACATTAACAA GGTGAACAAC
AAGTTGAAGG AGTTAAGTAT GGACCGCAGT GGAAAGAGAA AGCAAAGAAA CTACGGATCG
GCAACATACG AATCCGAGAA TCCAATCGTT GCCCCTCCCC CACCATATTC TCACTGA
 
Protein sequence
MSFKVNWKSL ETDSLTSWTK DLLTSALNLG KSPNILASSI LIKDLNFGKI APNFEILEIG 
ELGRDRFRGI FKINYEGDFH LTLHTNVQAN PLNIYYSNSM EKEIDSQFVT PNFLLSNEQF
ALPLDLKLSD IKISGIGIIV FSKLKGLTLV FRNDPLDSIK VSSTFDTVQV LANFLQKQIE
TQIRDLFRET LPTLIHQFSL KYLSLDNNSD DLHAHFASSS RTHSSALDPD NEFNNFTYSS
KNLQKNLQLF NTRETLDLHI PKFKGIIQRS HLEKFTQNYP SLLNSLYLNL HEIDMKSYNT
YNNNTGSNGI PIDLLINDKN FNRTNRVLKE ISDIQSNSFY KQSNNNKDTT VKPKRRRIKY
STRKKAASPT STLINDDFHM ASLHSSVASS MPMSMSSSLS DSEERPQLLA QPRPMRISPD
FYQAFLKSTP EQCWYQCKRV GLGTNYFNFA TSQPILTSPI KKDPARDFIK EKKSINYIDI
NKVNNKLKEL SMDRSGKRKQ RNYGSATYES ENPIVAPPPP YSH