Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28329 |
Symbol | MDM34 |
ID | 4851106 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 946981 |
End bp | 948777 |
Gene Length | 1797 bp |
Protein Length | 523 aa |
Translation table | |
GC content | 39% |
IMG OID | 640392814 |
Product | mitochondrial outer membrane protein involved in mitochondrial shape |
Protein accession | XP_001387416 |
Protein GI | 126274092 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.863481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.640618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTCA AAGTCAACTG GAAATCACTC GAGACCGACT CGTTGACATC TTGGACGAAA GATCTCTTGA CTAGTGCATT GAATCTGGGG AAAAGTCCTA ATATTCTTGC CTCAAGTATC CTGATTAAGG ATTTGAACTT TGGCAAAATT GCTCCCAACT TTGAGATTTT GGAGATTGGT GAGTTGGGCA GAGACAGATT CAGAGGCATT TTCAAGATTA ACTACGAAGG AGACTTCCAC TTGACGCTCC ATACAAATGT TCAGGCAAAT CCGTTGAATA TCTACTACTC TAATTCCATG GAAAAGGAGA TAGATAGCCA GTTTGTTACA CCTAACTTTT TACTTTCAAA TGAGCAGTTT GCTTTGCCTT TGGATTTGAA ACTTAGCGAT ATAAAAATCA GCGGTATCGG CATTATTGTG TTTTCCAAGC TGAAGGGATT GACGTTGGTG TTCAGAAATG ATCCATTAGA TTCCATTAAA GTCTCTTCTA CATTTGATAC AGTTCAGGTA TTGGCCAATT TCCTTCAGAA ACAGATCGAA ACCCAGATCA GAGATTTGTT CAGAGAAACG TTGCCCACTT TGATACATCA ATTTTCGCTC AAGTATCTCA GTCTCGATAA CAATTCAGAT GATTTACATG CTCATTTTGC ATCTTCGTCC AGAACTCACT CTTCAGCTTT GGATCCAGAC AACGAGTTCA ACAATTTTAC ATATTCGTCA AAGAATTTAC AGAAGAACTT GCAATTGTTT AATACTAGAG AAACATTGGA TTTGCACATT CCCAAGTTTA AGGGTATAAT ACAGAGATCG CATTTGGAGA AGTTTACCCA GAACTACCCT AGTTTGTTGA ACTCATTGTA TTTGAACTTG CACGAGATCG ATATGAAGTC CTACAATACA TATAACAACA ATACTGGATC CAATGGTATC CCCATTGACT TGTTGATTAA CGATAAGAAC TTCAACAGAA CCAATAGAGT CTTGAAAGAG ATATCGGACA TTCAATCTAA CAGCTTCTAC AAACAGAGCA ATAACAATAA GGACACCACT GTTAAGCCCA AAAGAAGAAG AATCAAGTAT AGCACCAGAA AGAAGGCAGC TTCGCCTGTT TCTGCAATTG ATACCGCTGC TCTTACTGGT TGTAATTTGT CTTCTATGGA TGTTAGCCAC GCTACGTCTA TTGAGCTTGC ACATGACATG TCTATACAAT CAGAGACTTC TACTTTGATC AACGATGACT TCCACATGGC GTCGTTACAT TCTTCAGTAG CTTCCTCAAT GCCTATGTCA ATGTCGTCTT CTCTTTCCGA TTCTGAAGAA AGACCTCAGT TGTTAGCTCA ACCTAGACCT ATGAGAATAT CACCAGATTT TTACCAAGCG TTCTTGAAGA GTACTCCTGG TCATTACCAG CCTTTATTTG AGAACAATGC TGGTATCAAT GTAAACGGTA ATATTGGCAA TAATGGCAAT AATCCTACTA TTAGCAATAT TGGTAACGTT AATGCCAATG TTAACAATAC TAATTCATCA TTATTATCAA GCGTTGGTTT GGGAACAAAT TACTTCAATT TTGCAACGAG CCAACCAATT CTGACGTCTC CCATTAAGAA GGACCCGGCC AGAGATTTCA TCAAAGAAAA GAAGTCCATC AACTATATTG ACATTAACAA GGTGAACAAC AAGTTGAAGG AGTTAAGTAT GGACCGCAGT GGAAAGAGAA AGCAAAGAAA CTACGGATCG GCAACATACG AATCCGAGAA TCCAATCGTT GCCCCTCCCC CACCATATTC TCACTGA
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Protein sequence | MSFKVNWKSL ETDSLTSWTK DLLTSALNLG KSPNILASSI LIKDLNFGKI APNFEILEIG ELGRDRFRGI FKINYEGDFH LTLHTNVQAN PLNIYYSNSM EKEIDSQFVT PNFLLSNEQF ALPLDLKLSD IKISGIGIIV FSKLKGLTLV FRNDPLDSIK VSSTFDTVQV LANFLQKQIE TQIRDLFRET LPTLIHQFSL KYLSLDNNSD DLHAHFASSS RTHSSALDPD NEFNNFTYSS KNLQKNLQLF NTRETLDLHI PKFKGIIQRS HLEKFTQNYP SLLNSLYLNL HEIDMKSYNT YNNNTGSNGI PIDLLINDKN FNRTNRVLKE ISDIQSNSFY KQSNNNKDTT VKPKRRRIKY STRKKAASPT STLINDDFHM ASLHSSVASS MPMSMSSSLS DSEERPQLLA QPRPMRISPD FYQAFLKSTP EQCWYQCKRV GLGTNYFNFA TSQPILTSPI KKDPARDFIK EKKSINYIDI NKVNNKLKEL SMDRSGKRKQ RNYGSATYES ENPIVAPPPP YSH
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