| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28317 |
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| Symbol | APN2 |
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| ID | 4851093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 910483 |
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| End bp | 911931 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640392801 |
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| Product | AP endonuclease |
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| Protein accession | XP_001387814 |
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| Protein GI | 126274079 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.563607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTGG CCCAGCTCCA GAAGCTAGAC CCACTTGACA AGATTGCACT GAAGCTGCTG
AATTTGACTA TTAGGTATGT CACGTTCAAT GTAAACGGAG TCAAAACACT TTTCAACTAC
TATCCTTGGA CACAATTCAA CCAAGATTAT GATCTTCTAT TCAGTTCACT CCAGGCTGAC
ATAATTACTC TTCAGGAGCT AAAGTTATCT TCTTCCAATA TTTCCAGTGT GAAAAACATC
GGCCACTTGC CTCATTATAA ATCGTTTATA TCTATACCAA AGGTGAAGCG AGGGTACAGT
GGAGTTGGAC TTTTCGTACG AATTCCAAGA GAAGAAGAAT CGTCAGCAGT GCGACGTAAC
TTACAAGTTA TTAAGGCTGA AGAGGGCATA ACAGGTTATT TATCCTCAGG ACTACTGGGC
GACGTCTGCT ACAGGGATCT ACCCGAGCTG GAAAGTATTG GAGGATATCC TGATGATTTG
GATTCTGTCA TGGGTCTAGA GCTAGACAGT GAAGGAAGAT GTGTTTGCAT AGAACTAGCT
TGCAACTTGG TGGTTTTCGC CTTGTATTGT CCTGCCAATT CTATGGGGGA AGATGAAGGA
GAAGCTTTCC GACTTAATTT CTTGAAGAAT CTCTTGAAGC GGTGCTACAA CTTGAAGTAC
AAACATGGCA AGGAAGTTAT TGTCATGGGA GATATAAACG TAAGTTTGGA CTTGATTGAC
AGTGCTGAGG GTATCGATGA TAGACAAAAA CAGAGGCTTG TTCTACCCAA GACAGATGGA
ATCGATTTTG AAACCATAAA CTACGATGAA TGTTTTAATT TCAAGAGATC AACACGAGCT
CGTGCCTTAT TGAATCAGTA CACCATTCAA TCTTTACAAC ATAACCTCTC CTTAGACCGA
CATCCAGACT ACGAGCAACA GTTTCTATAC GACACTACGC GATATCTACA AGGAAGACGA
ATGCAGATGT ATACAGTGTG GAATACCTTG AACAGTTCAC GTGCCATTAA TTTTGGTTCG
AGAATCGACC TTATCCTAGC CAGTAGCTAC AGAATGATTA AGAACATTTC CAATGCCGAT
ATCTGGCCAT TTATTCTTGG TTCTGATCAC TGTCCCGTTT TCACTGACTT CGAAGCATTA
GAAATTGATA AACCTGAAGA ATCGAAGTCA GCAAAACTTC ATTTTGAAGC CAAGTACCAT
CATAAACTCT CCCAAGTCAG AGATATATCT CTACTATTTT CCCGAAAGAG AACTTCTACT
CTGGAAAACA ATAGTCAAAA TTCTAGTCAA AATTCAGCTT CAGATGAAAC AGAAGTGAAA
CGAACAAAAC CAGAAGCTTC CAGTACAAAG CTGGCCTTCA AGTATGTTAG TCGTAAACCT
AAGAAGGTTG ATGGAACGAA GCCTATCAGT ACATTCTTCA CTCTCAACTC TACGAAGAAA
AGTTTGTAA
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| Protein sequence | MDLAQLQKLD PLDKIALKLL NLTIRYVTFN VNGVKTLFNY YPWTQFNQDY DLLFSSLQAD
IITLQELKLS SSNISSVKNI GHLPHYKSFI SIPKVKRGYS GVGLFVRIPR EEESSAVRRN
LQVIKAEEGI TGYLSSGLLG DVCYRDLPEL ESIGGYPDDL DSVMGLELDS EGRCVCIELA
CNLVVFALYC PANSMGEDEG EAFRLNFLKN LLKRCYNLKY KHGKEVIVMG DINVSLDLID
SAEGIDDRQK QRLVLPKTDG IDFETINYDE CFNFKRSTRA RALLNQYTIQ SLQHNLSLDR
HPDYEQQFLY DTTRYLQGRR MQMYTVWNTL NSSRAINFGS RIDLILASSY RMIKNISNAD
IWPFILGSDH CPVFTDFEAL EIDKPEESKS AKLHFEAKYH HKLSQVRDIS LLFSRKRTST
LENNSQNSSQ NSASDETEVK RTKPEASSTK LAFKYVSRKP KKVDGTKPIS TFFTLNSTKK
SL
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