| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28288 |
|---|
| Symbol | PCL7 |
|---|
| ID | 4851064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 856123 |
|---|
| End bp | 858552 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | 640392772 |
|---|
| Product | cyclin like protein interacting with PHO85 |
|---|
| Protein accession | XP_001387797 |
|---|
| Protein GI | 126274050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.840932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACG ACAACCATCC GGCGGTGTCG TCGTCCACGA CGTTCCACAA GCCTGCCGTC
TCCAACTTGA CCAAAAACTT GATGTCGTCC ACACCCACGC CATCTCTGTC GTCCACCCAC
ATGGACTACG ACAGCAGCAA TGTCATCCAT AGTAATGTTA ATAGTAATGC CAGCGGCAAT
GTTGATGCGG CAAACAACTC AAGCAACATC AACATCAACA TTTCGAATGA TCCGCCGTCT
AGTGCTGTGA ACGCCAGTAA TATAAACGAT AGCATCAATA CCAGTAGTGG TATCAACCCT
AGTGATCACT ACGCCAAATA CAACTCCAAC ATAAACACTA ACCACAATGC CAATGACAAC
GACATCATTG GCTCCAACAT CATCAATAAT AACGATTCTT CCAATTCCAA AATCAAAACT
ATTATCAACT CTATCAATAC TAATACTAAT ACTAACACTA ATGGTAATAC AGTCAACACT
AACAATTTGT TGCATCCAAG TGCCAGAGTA CCGACCGCCG TTCCGGTGAC TGGATCGATA
TCATTCTCAT CCACAGAACC TACGTCGTCG TCATTCCACT CGTCGTCTTA CCGTGCACCT
GGCTTCTATA GCACTCCAGC CAACGACTCC ATCAATTACA TCCCGTCTTC GCACAACACA
CCGACTGTAG TCTCATCGTC GTACTCCTCG GTCCACTCCT ACACGCCGTC ATTGCCCAAC
TCCAACAACC TCCAAAGTTT TACTTCGACC AATTCCAACG TTAATCCATT CAATTCCAGC
AACACAAATG ATAACCAACA GCAACAACAT CAACAACATC AACAGCTTCA GAATGCGACT
AAACCTCTGG GCTTTGTACC CCAATCGATG CCTACCACCA CCATCTCCAT GGATTCCGTC
AACTCCACTT CCAACCGCGA CTCTTTTGCA TCGGCTCTGT CTTCATTCAA TCCTCTGTTT
CCAGTTCAGC CAACCCCAAC ACCTCCATTG AATCAGAATC AACTACAACA ATCTCAAAAC
CAACAGCATC GTTTTCCAAG TTCATTTGGT TCTGCTCCTT TTGGCTCTGC TCCAACATCG
TCATCCTACC ATCACCATCC ATACTCCAGA ACAGCTAATA GACCTATACC AAACACTGCT
TCTAGTTCTG TTACGGCAAC ACCACCTGTA GACTCGGGTT ATCTTTCATC ATCTCATCAA
CATCAGCAAC ATCAACAACA GTACATCCAG CCTGAGCCTG ACCACTACAT GTCGTACAAA
GAGTTCTTGC ACAACTTGTC AGTTCGTGAT GGAAATAATC CTCCGCCTGG TGAGAATGCT
TCCATCTATG ATGGGCATTT GAACATTGTC GATTATCCAG TCAACGATCT CATCTTAATG
CTCTCTTGCC TTCTCACTAA AATCATAGAG GCTAATGACA AATTGCATCC CAACCATTTT
GATAACACCA TTGCCATGAG GCAGCGACTC AAGGAAGAGA GACGAATGAA AAAGATTCAA
CAGGCAGAGT TGAAGGAACA GAGAAGATTT GCCAGACGTC AAGAGAGAGA ACGAGTTCGG
TCTGCTAATA GACTGGGCTC GTTAACTACT TCCGATTCGA ACATGGAGAC CACCAGACAG
CATTCTGTAG GAGGAGCACT CATTGTAGAC GTTGATGTGG TAGACGTGGG AGACGAAGAC
GACAACATAG AAGTAGACCA CGACGACTCA AACTCGCATG GCAATCCAAT AGATATAGAT
TCTGACGAGG ATGAAGACGA AGACCTAGTT ATAGATAGTC AGGATGAAGA TGATGAACAA
GACGAAATGA AGAACAAGTA TTTGGCTAAT GTTTTGGCTT TCCATGGTAC CAATGTTCCA
GGTATTTCTT TACATGCCTA CCTAGCCAGA GTGTTGAAGT ACTGTCCTGT TACGAATGAA
GTTTTCCTTT CGTTGTTAGT TTATTTCGAT AGAATCGCAA AGAAAGCCAA CAACCTCAAC
CAGAAGAGAA AGACCTCATC GCTGGGGGCC GGTGCTGGAG GCGCGGCCAT TAATGAAGAC
ACTGCTAATG CTGGTGATGC CGAGCAGTTG TTTGTCATGG ATTCGTACAA CATCCATCGT
CTCATCATTT CTGGAATCAC GGTTTCGTCT AAGTTCTTCA GTGATATCTT CTACAAGAAT
CTAAGATACG CCAAGGTGGG TGGCTTACCG TTGGAAGAGT TGAACTACTT GGAGTTGCAA
TTCTTGTTAT TGTTGGATTT CAAGTTAATG ATCTCAGTCG AAGATCTTCA GAATTATGGC
GATTTGTTGC TTCGTTTCTG GAAACGGGAG CAAATCACCA ACGAGTTAGT GCACAACACC
AACAACACCA ACAATAATAG CAATGCCAGT GCCAGCAACA TAGGAGATCC TAGCGATGTG
GGAAACCAAA AGGATGGCAT CAAGAGTTAG
|
|---|
| Protein sequence | MQNDNHPAVS SSTTFHKPAV SNLTKNLMSS TPTPSLSSTH MDYDSSNVIH SNVNSNASGN
VDAANNSSNI NINISNDPPS SAVNASNIND SINTSSGINP SDHYAKYNSN INTNHNANDN
DIIGSNIINN NDSSNSKIKT IINSINTNTN TNTNGNTVNT NNLLHPSARV PTAVPVTGSI
SFSSTEPTSS SFHSSSYRAP GFYSTPANDS INYIPSSHNT PTVVSSSYSS VHSYTPSLPN
SNNLQSFTST NSNVNPFNSS NTNDNQQQQH QQHQQLQNAT KPLGFVPQSM PTTTISMDSV
NSTSNRDSFA SALSSFNPLF PVQPTPTPPL NQNQLQQSQN QQHRFPSSFG SAPFGSAPTS
SSYHHHPYSR TANRPIPNTA SSSVTATPPV DSGYLSSSHQ HQQHQQQYIQ PEPDHYMSYK
EFLHNLSVRD GNNPPPGENA SIYDGHLNIV DYPVNDLILM LSCLLTKIIE ANDKLHPNHF
DNTIAMRQRL KEERRMKKIQ QAELKEQRRF ARRQERERVR SANRLGSLTT SDSNMETTRQ
HSVGGALIVD VDVVDVGDED DNIEVDHDDS NSHGNPIDID SDEDEDEDLV IDSQDEDDEQ
DEMKNKYLAN VLAFHGTNVP GISLHAYLAR VLKYCPVTNE VFLSLLVYFD RIAKKANNLN
QKRKTSSLGA GAGGAAINED TANAGDAEQL FVMDSYNIHR LIISGITVSS KFFSDIFYKN
LRYAKVGGLP LEELNYLELQ FLLLLDFKLM ISVEDLQNYG DLLLRFWKRE QITNELVHNT
NNTNNNSNAS ASNIGDPSDV GNQKDGIKS
|
|---|
| |