Gene PICST_28271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28271 
SymbolSTB5 
ID4851045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp797782 
End bp799914 
Gene Length2133 bp 
Protein Length710 aa 
Translation table 
GC content40% 
IMG OID640392753 
ProductRac GTPase-activating protein BCR/ABR 
Protein accessionXP_001387791 
Protein GI126274031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.692213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.257016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCTC GAGCTCCTGA AGTCAATGAA GCTGACTCCA ACATCCATGA GCCAAAGTCC 
GGTGATCTGG TTTCAAAGTC CAGCCAGATT TCGAACTCCA TATTAAATTC TCCATCGAAA
TCACAAATAT CTCACATACC GACACAGCCC GAGCTGGAGT CCATCATGGA TCAACCTACG
TCCAAGAAAG AGTACAGAAA AATGTTAATG TTCGATGATA GCAATAGCAA AAACAGCGAA
AATAGCAATA AAAATGTTGC ACAGAATCCA AGATCAAATT TCAACTCCAA CTCTTCGACA
AGTACTAAAC CTGAACCTCC CCTGTCTACG CCTAGTATTG GCCCGTCTCA TATGTTTTCT
CGTTTCCGAA TGAAGACACC GGCGAAACAT AACCCTCCTC CTAAAATTTT TCCATCCTCG
TCAACATTCA AAGTGGAAAA AGTCACTAGT TGCATTCGTT GTAGGAGATT GAAGAAGAAA
TGTGATAAAA AATTACCCGA ATGTATCAAT TGTGAGAAAG TGGGTGAACC CTGTAAATAT
GTACCGAGGA AGCTGAGAAA GAGAGACTAT GATGAAGTTG AAGTAAAGTC ACCTATTTCA
TCTGACAACG ATAACTTATC TATGACTGAA AAACCACAAA AGTCTCGAAA ATTATCTTCT
AGTTCTAGAA GCCCTATAAG TAGTCCAATA GTCATTCCAT CCATTCCATC CATTATCCCA
AAACAGACTA TTTCTAATTC TAAGTCCTGG ATGGCAGTGG TAGCCCCTCC TATGCCTATC
AATCTCTTCG ATTCTAAGCA ACCACTGTAT GAGCTAAATG TATCTAATTC TTTACCAAAG
GATATCTCTC TACCATCCAA CCTTCAACCG AATTTTCTAT CCAATTGCGT TACGAAATAT
TTCTCAATGT ACCACAGCAT GTATCCGTTG ATATCGAAAT CATTGTTTCT AAGCAAAAGT
AAATCTGTTC TCACCGAAAA AGGTATCGAG TCCGATATAC TCAGTCCAGA AGACCAATTT
GACCTTTACA TGATATTGGG CATTGGTTGC AAAACAATTG AAATTTCTTC CAATATTCCA
TCTGATAATC AAATCTCAGG CATTTTGGTT TCTCGTGCTT TGAAGCTGGC CCCATCCAAT
TTCGCCAGCA ATGATCTAAA CACGATTCGC AGTTTATTGT TGGCAGGCCT TTATTCGTTA
TTGGAAAATT CCGTATGGCC CTCTTGGGAG ATAACTGGCC GGTTGATACG TCTTGCTTTT
TATCTAGGTC TCCATACCAA AAGATTTCGA AAACTGACAA TGGAGCAGCG AGAAACGAGA
AATCGCTTAT TCTGGAGTAT CTACAATTTG GACCGAACGG TATCGGTCTC ACTTGGGAAA
CCTTTAGGAA TTAATGATGA TGATATATTG GTTCCGTTTC CATCTGAATT AAATTCAGAA
CCAGAAGATA TCGCTTGCAC AAACTTGGCC ATTCGTATGA GAAAACTCGA AGGCATAATC
TACAGCAAGA TTCAATCGAA ATCAGTTGAA CACAGATATA AACTGGATGA AAAGGAAAAA
ATTCTACAGT CACTTGTTGA TGATCTAACT GGATGGCATC AACTTGCATC TGCAATTGGA
AAGCACCCAA CAGCCTCTGG TTATCATTGG CACGATGCTA TGTATCATAT CTACTTGACG
ATAATATTCC AACCTTCTTA CCTAAATCCT TATCCTACCA ACGAGAACTG GAAAACGGTT
ACAGAATCTT GTTTGCATGC CATAAAGGGC ATGTATGCTC TTGCACGCAG CGAAATGCTC
CAATTGATTT GGACCACATT ATATCGATTT TTGAACGTCT GCTATACGAC TCTATATTGC
TTACAGAAGT TGAGACTCAA GCTCTCCGAT ATCCAAGTGG AAATTGGCTA CTGTATCGAG
ATCTTGCGAT TGTTTGCATC CAATTGGGAG GTTTCCCGAA AATGTGCAGA TATCTTTATT
CAATTGCAAG ACACTGTGAC GACACCAGAC GATACCGGTG GACCCATTCG AGACCAAATG
ATCAAAACGT TTGCTGAGCT CAACAAAAAG TTTCAGAATG CGGTGCTGGA CATCGGTTTA
GACTATCCCA TTTACAATGA GTTCTACTTG TAG
 
Protein sequence
MRSRAPEVNE ADSNIHEPKS GDLVSKSSQI SNSILNSPSK SQISHIPTQP ELESIMDQPT 
SKKEYRKMLM FDDSNSKNSE NSNKNVAQNP RSNFNSNSST STKPEPPLST PSIGPSHMFS
RFRMKTPAKH NPPPKIFPSS STFKVEKVTS CIRCRRLKKK CDKKLPECIN CEKVGEPCKY
VPRKLRKRDY DEVEVKSPIS SDNDNLSMTE KPQKSRKLSS SSRSPISSPI VIPSIPSIIP
KQTISNSKSW MAVVAPPMPI NLFDSKQPLY ELNVSNSLPK DISLPSNLQP NFLSNCVTKY
FSMYHSMYPL ISKSLFLSKS KSVLTEKGIE SDILSPEDQF DLYMILGIGC KTIEISSNIP
SDNQISGILV SRALKLAPSN FASNDLNTIR SLLLAGLYSL LENSVWPSWE ITGRLIRLAF
YLGLHTKRFR KLTMEQRETR NRLFWSIYNL DRTVSVSLGK PLGINDDDIL VPFPSELNSE
PEDIACTNLA IRMRKLEGII YSKIQSKSVE HRYKLDEKEK ILQSLVDDLT GWHQLASAIG
KHPTASGYHW HDAMYHIYLT IIFQPSYLNP YPTNENWKTV TESCLHAIKG MYALARSEML
QLIWTTLYRF LNVCYTTLYC LQKLRLKLSD IQVEIGYCIE ILRLFASNWE VSRKCADIFI
QLQDTVTTPD DTGGPIRDQM IKTFAELNKK FQNAVLDIGL DYPIYNEFYL