Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28271 |
Symbol | STB5 |
ID | 4851045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 797782 |
End bp | 799914 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | |
GC content | 40% |
IMG OID | 640392753 |
Product | Rac GTPase-activating protein BCR/ABR |
Protein accession | XP_001387791 |
Protein GI | 126274031 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.692213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.257016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCTC GAGCTCCTGA AGTCAATGAA GCTGACTCCA ACATCCATGA GCCAAAGTCC GGTGATCTGG TTTCAAAGTC CAGCCAGATT TCGAACTCCA TATTAAATTC TCCATCGAAA TCACAAATAT CTCACATACC GACACAGCCC GAGCTGGAGT CCATCATGGA TCAACCTACG TCCAAGAAAG AGTACAGAAA AATGTTAATG TTCGATGATA GCAATAGCAA AAACAGCGAA AATAGCAATA AAAATGTTGC ACAGAATCCA AGATCAAATT TCAACTCCAA CTCTTCGACA AGTACTAAAC CTGAACCTCC CCTGTCTACG CCTAGTATTG GCCCGTCTCA TATGTTTTCT CGTTTCCGAA TGAAGACACC GGCGAAACAT AACCCTCCTC CTAAAATTTT TCCATCCTCG TCAACATTCA AAGTGGAAAA AGTCACTAGT TGCATTCGTT GTAGGAGATT GAAGAAGAAA TGTGATAAAA AATTACCCGA ATGTATCAAT TGTGAGAAAG TGGGTGAACC CTGTAAATAT GTACCGAGGA AGCTGAGAAA GAGAGACTAT GATGAAGTTG AAGTAAAGTC ACCTATTTCA TCTGACAACG ATAACTTATC TATGACTGAA AAACCACAAA AGTCTCGAAA ATTATCTTCT AGTTCTAGAA GCCCTATAAG TAGTCCAATA GTCATTCCAT CCATTCCATC CATTATCCCA AAACAGACTA TTTCTAATTC TAAGTCCTGG ATGGCAGTGG TAGCCCCTCC TATGCCTATC AATCTCTTCG ATTCTAAGCA ACCACTGTAT GAGCTAAATG TATCTAATTC TTTACCAAAG GATATCTCTC TACCATCCAA CCTTCAACCG AATTTTCTAT CCAATTGCGT TACGAAATAT TTCTCAATGT ACCACAGCAT GTATCCGTTG ATATCGAAAT CATTGTTTCT AAGCAAAAGT AAATCTGTTC TCACCGAAAA AGGTATCGAG TCCGATATAC TCAGTCCAGA AGACCAATTT GACCTTTACA TGATATTGGG CATTGGTTGC AAAACAATTG AAATTTCTTC CAATATTCCA TCTGATAATC AAATCTCAGG CATTTTGGTT TCTCGTGCTT TGAAGCTGGC CCCATCCAAT TTCGCCAGCA ATGATCTAAA CACGATTCGC AGTTTATTGT TGGCAGGCCT TTATTCGTTA TTGGAAAATT CCGTATGGCC CTCTTGGGAG ATAACTGGCC GGTTGATACG TCTTGCTTTT TATCTAGGTC TCCATACCAA AAGATTTCGA AAACTGACAA TGGAGCAGCG AGAAACGAGA AATCGCTTAT TCTGGAGTAT CTACAATTTG GACCGAACGG TATCGGTCTC ACTTGGGAAA CCTTTAGGAA TTAATGATGA TGATATATTG GTTCCGTTTC CATCTGAATT AAATTCAGAA CCAGAAGATA TCGCTTGCAC AAACTTGGCC ATTCGTATGA GAAAACTCGA AGGCATAATC TACAGCAAGA TTCAATCGAA ATCAGTTGAA CACAGATATA AACTGGATGA AAAGGAAAAA ATTCTACAGT CACTTGTTGA TGATCTAACT GGATGGCATC AACTTGCATC TGCAATTGGA AAGCACCCAA CAGCCTCTGG TTATCATTGG CACGATGCTA TGTATCATAT CTACTTGACG ATAATATTCC AACCTTCTTA CCTAAATCCT TATCCTACCA ACGAGAACTG GAAAACGGTT ACAGAATCTT GTTTGCATGC CATAAAGGGC ATGTATGCTC TTGCACGCAG CGAAATGCTC CAATTGATTT GGACCACATT ATATCGATTT TTGAACGTCT GCTATACGAC TCTATATTGC TTACAGAAGT TGAGACTCAA GCTCTCCGAT ATCCAAGTGG AAATTGGCTA CTGTATCGAG ATCTTGCGAT TGTTTGCATC CAATTGGGAG GTTTCCCGAA AATGTGCAGA TATCTTTATT CAATTGCAAG ACACTGTGAC GACACCAGAC GATACCGGTG GACCCATTCG AGACCAAATG ATCAAAACGT TTGCTGAGCT CAACAAAAAG TTTCAGAATG CGGTGCTGGA CATCGGTTTA GACTATCCCA TTTACAATGA GTTCTACTTG TAG
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Protein sequence | MRSRAPEVNE ADSNIHEPKS GDLVSKSSQI SNSILNSPSK SQISHIPTQP ELESIMDQPT SKKEYRKMLM FDDSNSKNSE NSNKNVAQNP RSNFNSNSST STKPEPPLST PSIGPSHMFS RFRMKTPAKH NPPPKIFPSS STFKVEKVTS CIRCRRLKKK CDKKLPECIN CEKVGEPCKY VPRKLRKRDY DEVEVKSPIS SDNDNLSMTE KPQKSRKLSS SSRSPISSPI VIPSIPSIIP KQTISNSKSW MAVVAPPMPI NLFDSKQPLY ELNVSNSLPK DISLPSNLQP NFLSNCVTKY FSMYHSMYPL ISKSLFLSKS KSVLTEKGIE SDILSPEDQF DLYMILGIGC KTIEISSNIP SDNQISGILV SRALKLAPSN FASNDLNTIR SLLLAGLYSL LENSVWPSWE ITGRLIRLAF YLGLHTKRFR KLTMEQRETR NRLFWSIYNL DRTVSVSLGK PLGINDDDIL VPFPSELNSE PEDIACTNLA IRMRKLEGII YSKIQSKSVE HRYKLDEKEK ILQSLVDDLT GWHQLASAIG KHPTASGYHW HDAMYHIYLT IIFQPSYLNP YPTNENWKTV TESCLHAIKG MYALARSEML QLIWTTLYRF LNVCYTTLYC LQKLRLKLSD IQVEIGYCIE ILRLFASNWE VSRKCADIFI QLQDTVTTPD DTGGPIRDQM IKTFAELNKK FQNAVLDIGL DYPIYNEFYL
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