| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28267 |
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| Symbol | CTA9 |
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| ID | 4851041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 790255 |
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| End bp | 791664 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640392749 |
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| Product | transactivator protein |
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| Protein accession | XP_001387788 |
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| Protein GI | 126274027 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.285828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCCACG ATAACCTTCG CCGACACTAC CACCACGAGG TACATGACCT CCACAAACCC
AACTGTGTGT TTTCGTCCGA TATCGCAGAG AAGGTGGCGA CAGCTGTTGA TTCATATGTT
GCTCTAAGGA GCACAGCGAA CGAGAGCACC GATGTAGATC TAGGCTCGAT GCTAGAGTTC
CACATCAACA TCGAATTGAA CACGCTCTTG GTACGAAACA ACTCCCTAAA GCCAACAGAA
CTCATGAAAA ATAACCACAT CTGTTTGGCG AAGTCGACGA ATCGCAACAA GCTCAGAAAC
ACTGCTACTG CTATAGACAC TCTTCTCGCA ATTTCACATA CAAAGCCCGT AGATCCACGG
GCACTCCGTT CGGACGAAGT GTTTATCGTC GACTTGACGT TGCATGTGCT TCATTTCATA
GCCAGCTTCG ATTTGGACGA GTTACCGCAG TCGCTAGTGC TTGACATTGT AGATGATGAG
ACCCACCAGC TCTTGAATGT GTGCGATTCG CAACTAATGG TACAGATCGA AACGTATATA
AAACATAAAT TCATCCTAGA GGTTGGCAAT CGCTTGGGTC AGCCCGTTTT TGTCCCAAGC
GAGACTCTGA GCGATACAAT AATCGAAGGC TTGGGGTATG TCTCGGGAGA TTACTCTGTA
AGCGAGACTA CTCTTGAAGG AACTGATAAT GAAAATGACG GCGAGTTGCC AGACAAATCC
ATTCTTTATA CCAATGGCGA GTACACTTCT TCGTTGGAGG ATTTGATCAT ACTTCCTTCC
AATGATACAG TACGATCGGA AGAAGACGAT GAAATGACAC CAGGATCGTC GACAATGTTC
GCTTCTCGGC CAAACAGGCT CCGCACAATT CGGGAAGAAA AGAAGGAGGA GTCCTTTATC
GAAAACATTA ACAATTTGCG ACACAATGAA GAGTATATCA ACTTAGATGA ATTGCAAGAA
GTAGAATGCG ATTACGATAA TCACATAGCA GGAAATTCTG AACAGCTTGG CCCAGGTATT
GAGCTCGAAC TTCCACGTTC TATCGATTCC GAGTTCACTT CGCCTGCATC GCCCGCAGGC
ACCGACAGGT CGCTAAGTAG ACAGCTGTCT ATAGCATCGA ACTACTCACC TACAAAAAAA
GTGTCGCGAA TGACATCGTC GCCGTCATTC TCACTAGTCA ACTACGAAGA GAACCACGGC
TTGGAGTATG CCTTCAAAGC TAAATCACAG TCGGTGCCGA ACTACATCAG GGAAGATAAG
AAATTCAAAT TTATCAAGGT GGGAAAGGTG CAAAAATTCG TTCATTTATT TGAAGAGAAG
ACTGGCTCAA ACACTCCGAA GGTGACTCCG AAGTCCAGCA AAGCTAGTAC TAGAGCTTCC
AGTCCCGAAA GACAATCAGC AACCTGTTAA
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| Protein sequence | MLHDNLRRHY HHEVHDLHKP NCVFSSDIAE KVATAVDSYV ALRSTANEST DVDLGSMLEF
HINIELNTLL VRNNSLKPTE LMKNNHICLA KSTNRNKLRN TATAIDTLLA ISHTKPVDPR
ALRSDEVFIV DLTLHVLHFI ASFDLDELPQ SLVLDIVDDE THQLLNVCDS QLMVQIETYI
KHKFILEVGN RLGQPVFVPS ETLSDTIIEG LGYVSGDYSV SETTLEGTDN ENDGELPDKS
ILYTNGEYTS SLEDLIILPS NDTVRSEEDD EMTPGSSTMF ASRPNRLRTI REEKKEESFI
ENINNLRHNE EYINLDELQE VECDYDNHIA GNSEQLGPGI ELELPRSIDS EFTSPASPAG
TDRSLSRQLS IASNYSPTKK VSRMTSSPSF SLVNYEENHG LEYAFKAKSQ SVPNYIREDK
KFKFIKVGKV QKFVHLFEEK TGSNTPKVTP KSSKASTRAS SPERQSATC
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