Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28260 |
Symbol | |
ID | 4851035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 777950 |
End bp | 779050 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | |
GC content | 43% |
IMG OID | 640392743 |
Product | predicted protein |
Protein accession | XP_001387378 |
Protein GI | 126274021 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.295741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATGA TACAGTCGCG TATAGCGACA AGACTACTGT CGATAATAGT GCATCATCGG CAATTGACGT ATCTAAGCGA CCGGTGGGTG AAAGAGCCAT TTGAATTGGG CTACCCCAAC TTCGATAGCA CTATAGCCCT GGAAAAGGCA AAAATCCATG ACATACTCTT TGGAGATAGC AATAGAGGCG GTGATGAGTC AATAGATAAT CTCGAGCGTC CATTGAGCCA CTATCATTCT AAACCAAAGG ATATTGTGGG CCAAGGATTG TACGCATTAG AAACGGGCTA CAAGACAAAA AACCATTTGA AAATTCTCTG GAACAAGTTA GATGAGAAGG AAAAAACGAG ATTAACGTCC AGTCCCAACA GAGAGCGATT ATATGATGAG CGAATCCGAG TGTGGAAGGG TTACGAAGTG GTGGAGCATC TCAAGCGTAA CTCGGACAAG TACAACTGGA ATCCGTATCC TTTGCTGGGG CTATTTCCAT GGGAGATAGT CAAGGATAAG CTCAGAAACC GGAAGCCGGT GATGGCTTTT GAACAGGACT ACTACGATGT GTTGATCAAA GAAGCATTTA GTGGAAATAA AAGAAGAACG GCATATCTGA TATTCTATGC CGATATCAAA AATCAACGCC GTTTGGGCAG TAGAGCCTGG ATGACTGTAT CGAAGCTATA TGAACAATTA CCTCCAGAAA GAAGAGAGTA CTACGAAGAA AGGGAACAGA GAAGAAAAGT TTTTATTCCC GTGCAAAAGG CTCCTGTGGG ACATCCGCCT TTTCATGTCT TCTTTGATGA GTACATTGAA CAGAATTCGA CTTCTTCTAG ACCTCTTCTC GGGGCTTCGA CAAGATGGGC AGCAATGACC GACGTAGAAA GACAAAACTA CACACCATTG GATTCCAAGT ACCATCATAC AAGAGAGTAC AAGGAGAGAA AGCTCCTTCT AATGACCCAT ATTGTCTTGG ACTACATCTA TCATGTCGGA GGTGTTGAAG GAGTTGATGG TAGCTACAGT TGGGTTCAAG ACATGAAGGA GAGAACAGTT GGGTTTACGT ATCTCCACAA GATGTACACA GATGATAAAT GGGATATGTA A
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Protein sequence | MIMIQSRIAT RLLSIIVHHR QLTYLSDRWV KEPFELGYPN FDSTIALEKA KIHDILFGDS NRGGDESIDN LERPLSHYHS KPKDIVGQGL YALETGYKTK NHLKILWNKL DEKEKTRLTS SPNRERLYDE RIRVWKGYEV VEHLKRNSDK YNWNPYPLLG LFPWEIVKDK LRNRKPVMAF EQDYYDVLIK EAFSGNKRRT AYLIFYADIK NQRRLGSRAW MTVSKLYEQL PPERREYYEE REQRRKVFIP VQKAPVGHPP FHVFFDEYIE QNSTSSRPLL GASTRWAAMT DVERQNYTPL DSKYHHTREY KERKLLLMTH IVLDYIYHVG GVEGVDGSYS WVQDMKERTV GFTYLHKMYT DDKWDM
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