Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28240 |
Symbol | RPB7 |
ID | 4851016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 720126 |
End bp | 720647 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | |
GC content | 47% |
IMG OID | 640392724 |
Product | RNA polymerase II subunit |
Protein accession | XP_001387367 |
Protein GI | 126273978 |
COG category | [K] Transcription |
COG ID | [COG1095] DNA-directed RNA polymerase, subunit E' |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.18212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTCT TGAAGGACTT GTCATTGAAT TTGACGTTGC ACCCCTCATA TTTCGGGCCG CAGATGGACC AGTACTTGAG AGACAAGCTC TTGAGTGACG TGGAAGGCAC CTGCACTGGT CAGTTTGGTT ACATTGTATG TGTTTTGGAT TGCATGAATA TAGATGTAGG TAAAGGGAGG ATTATCCCAG GCTCAGGTAT GGCTGAGTTC GAAGTCAAGT ACAGAGCCGT GGTGTGGAAA CCGTTCAAAG GTGAAGTCGT AGATGCTGTA GTCACAACTG TCAACAAGAT GGGGTTCTTT GCCGATGTCG GTCCCCTTTC TGTGTTTGTC AGTACCCACT TGATTCCCTC GGATATGAAG TTCAATCCTT CCGCCAACCC TCCAGCATAT GTCAGTCCTG ATGAAAACAT CGAAAAGGGC TCGAGAGTCA GACTAAAGAT CGTAGGTACC AGAACAGACG TCAACGAAAT CTATGCCATC GGTAGCATCA AGGAAGACTA CTTGGGCCCA AGTCCCATGT GA
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Protein sequence | MFFLKDLSLN LTLHPSYFGP QMDQYLRDKL LSDVEGTCTG QFGYIVCVLD CMNIDVGKGR IIPGSGMAEF EVKYRAVVWK PFKGEVVDAV VTTVNKMGFF ADVGPLSVFV STHLIPSDMK FNPSANPPAY VSPDENIEKG SRVRLKIVGT RTDVNEIYAI GSIKEDYLGP SPM
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