Gene PICST_28240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28240 
SymbolRPB7 
ID4851016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp720126 
End bp720647 
Gene Length522 bp 
Protein Length173 aa 
Translation table 
GC content47% 
IMG OID640392724 
ProductRNA polymerase II subunit 
Protein accessionXP_001387367 
Protein GI126273978 
COG category[K] Transcription 
COG ID[COG1095] DNA-directed RNA polymerase, subunit E' 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.18212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTCT TGAAGGACTT GTCATTGAAT TTGACGTTGC ACCCCTCATA TTTCGGGCCG 
CAGATGGACC AGTACTTGAG AGACAAGCTC TTGAGTGACG TGGAAGGCAC CTGCACTGGT
CAGTTTGGTT ACATTGTATG TGTTTTGGAT TGCATGAATA TAGATGTAGG TAAAGGGAGG
ATTATCCCAG GCTCAGGTAT GGCTGAGTTC GAAGTCAAGT ACAGAGCCGT GGTGTGGAAA
CCGTTCAAAG GTGAAGTCGT AGATGCTGTA GTCACAACTG TCAACAAGAT GGGGTTCTTT
GCCGATGTCG GTCCCCTTTC TGTGTTTGTC AGTACCCACT TGATTCCCTC GGATATGAAG
TTCAATCCTT CCGCCAACCC TCCAGCATAT GTCAGTCCTG ATGAAAACAT CGAAAAGGGC
TCGAGAGTCA GACTAAAGAT CGTAGGTACC AGAACAGACG TCAACGAAAT CTATGCCATC
GGTAGCATCA AGGAAGACTA CTTGGGCCCA AGTCCCATGT GA
 
Protein sequence
MFFLKDLSLN LTLHPSYFGP QMDQYLRDKL LSDVEGTCTG QFGYIVCVLD CMNIDVGKGR 
IIPGSGMAEF EVKYRAVVWK PFKGEVVDAV VTTVNKMGFF ADVGPLSVFV STHLIPSDMK
FNPSANPPAY VSPDENIEKG SRVRLKIVGT RTDVNEIYAI GSIKEDYLGP SPM