| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28222 |
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| Symbol | SVF1 |
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| ID | 4850999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 670988 |
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| End bp | 672145 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 640392707 |
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| Product | protein involved in the diauxic switch |
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| Protein accession | XP_001387768 |
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| Protein GI | 126273960 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.230567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAT GGGTTCAATC TGGCCTTTCG GCCGTGGCCG GCACTGCCGA GCCTGAGTAC
GGAAGAGAAG CCATCCACAC CATCACCGAC TCTATCGTCA ATGGTAATGG TGACGTTGCT
GTCTCTAGAG ATACTACCAT CAAGGACTTC AACTGGTTGT GTCTAGACTA CACCAACGTC
GAGACCCAGA CGTTCTACTT CACCGACTTG GTCAACAAGT ACGCAGGCTT TGCGCAGATC
ATCCATTCAA ACCTTATGGG CGTTCACACT ACAGCACAGT TCACTTTCCG TTTGTTTCAC
CACGACGAAG ACAAGGCTGA AGACAACATC TGGACTTCAA CCAAGTTGGA AAACTTTCGC
ACCGATGGCT CAAACTTCTA CGCTGACAAA GTGTCGTTTG AACTCAACGA CGACAATACC
ACTTACACCT TGAAGTCGCA CGTAACCGAA GAGGCGCTTG TAGAATTAAC TGTGACACGG
TTGACTCCCG GTGTCATCTT TGGTAAAGAC GGAACCACTT ACTACGGTGA TGACGTAGCA
AACCCCTGGG GTTCGATGAG ACACTTGTTC TGGCCAAGAT GTACCGTTAA CGGCACAGTC
AAGACTCCAA CCCAGACGTT TGAAATTTCT GGCTACACCA TGTTTGTCAT GGCTCTTCAG
GGCATGAAGC CTCACCACGC TGCCAAGGCC TGGAACTTCA TGAACTTCCA CTCGAAAACC
TACTCAGCTG TCCAAATGGA ATTCACTACG CCTATTTCGT ACGCCAACAC CAAAGTCAAC
GTCGGCATCA TCTCTAAGGA TGGTGAAATC GTCCTTGCCA CCATTAACAA CGTAGTACTC
CACCAAGACC CCAAGGAGGA TCCTGGTGTG GGCTGGCACG TGCCTACAGC CATTACCTTC
AAGTACATCA AGGACAAGAA GGAAGAAGTG GCCAAGGACG ACGACGTTGT CGTAGGTTCT
GTTTCCGGTC CTTTGACCAC TTTGGTGGAG AGGGTCGATG TCATGGCAGA GATTCCGCAA
TTGGTCAAAA ACATCGTCTC TGGTGTTGTT GGAACCAAGC CGTACATCTA CCAGTACTGC
AACGAATTTG ACATCGAAGT GGGCCAGGAC AAGGAAAAGG GTCTTGGATT CACAGAAGTC
ACATTCATTT CTGAATAG
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| Protein sequence | MLKWVQSGLS AVAGTAEPEY GREAIHTITD SIVNGNGDVA VSRDTTIKDF NWLCLDYTNV
ETQTFYFTDL VNKYAGFAQI IHSNLMGVHT TAQFTFRLFH HDEDKAEDNI WTSTKLENFR
TDGSNFYADK VSFELNDDNT TYTLKSHVTE EALVELTVTR LTPGVIFGKD GTTYYGDDVA
NPWGSMRHLF WPRCTVNGTV KTPTQTFEIS GYTMFVMALQ GMKPHHAAKA WNFMNFHSKT
YSAVQMEFTT PISYANTKVN VGIISKDGEI VLATINNVVL HQDPKEDPGV GWHVPTAITF
KYIKDKKEEV AKDDDVVVGS VSGPLTTLVE RVDVMAEIPQ LVKNIVSGVV GTKPYIYQYC
NEFDIEVGQD KEKGLGFTEV TFISE
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