Gene PICST_28198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28198 
Symbol 
ID4850976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp604992 
End bp605372 
Gene Length381 bp 
Protein Length126 aa 
Translation table 
GC content47% 
IMG OID640392684 
Productpredicted protein 
Protein accessionXP_001387347 
Protein GI126273937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.712661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0339659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTTT CTTTCTCTTC TTTAAGTATT TTGGCTCTTG CCACCACGTC CTTTTGCTTG 
CCTCAACAAA ATTCTAAAGC AAAAAATCTT GGTCTTAATA ACTTAGTCAA GCAAGTTCAA
GGTCATACAA CTCAAGCAGT AGCACCTGCT CAGAAAACCA ACGGAGTTAC TTTATCTGGT
GGCGGTATAG GTGCTGGTAT TGGTGGCGAG ATCTTCCCTG GAATCGCTAT TGGAGCCGGA
GTTGGTGCTG GTGAAGGAGA CATCGAGGCC GATGGTATCG AACTCGAAGG TGCTGGTGTC
GGTGCAGGAA TTGGTGCTGA CATCGATGGC CACTTGATCG GTGTGGGTAT TGGAGCTGGT
TTAGGAGGTA TTGTCCTCTA A
 
Protein sequence
MQLSFSSLSI LALATTSFCL PQQNSKAKNL GLNNLVKQVQ GHTTQAVAPA QKTNGVTLSG 
GGIGAGIGGE IFPGIAIGAG VGAGEGDIEA DGIELEGAGV GAGIGADIDG HLIGVGIGAG
LGGIVL