Gene PICST_28175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28175 
SymbolSPO73 
ID4850954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp546416 
End bp546940 
Gene Length525 bp 
Protein Length174 aa 
Translation table 
GC content46% 
IMG OID640392662 
ProductSporulation-specific protein 73 
Protein accessionXP_001387337 
Protein GI126273915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0802916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.637046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACT TCGAATATGT AGAACTCATC CAGCGCTTGA GCATCCAGCT AGAGACTCAA 
CATTTCAAAG ACTCGTCGCT CAACTCTACG TTAGCCATCC TTTCGCTGTT CAATGACGAC
ATCATAGCCA CAGACATCCA GTTCGACTTC GTGCTAGAGA ACCAGCGTGG AATGAAATTG
TTTGGCATAC CTCTCTACTC CAAGAACTCG CTTCTTCCTC TCATAGATCC ATCCACCTAC
CAATCGATCA AGGGAAAACG GCTTCTCATC TCAGCGGACC ATTTGAACAA CTTTCCGCTT
CCCGATTTCA GCTGGACCTG GAGCTGGGAC TCGTGGTATG TTCTAATGTG CAACGACGTA
GACGACCAGG GCTGGGTGTA TTCAAATTTG TTCTTCAACA ACTACTTCAC GGACAGAACC
TGGAAAGGAA AATACTATCT AGGCAACTTT GTCCGTAGAC GGATCTGGGT CAGAATGAGA
AAGAAGAGCG AGATTAGTGG ATCAGATAAC AGAAAAGGAG AATGA
 
Protein sequence
MDDFEYVELI QRLSIQLETQ HFKDSSLNST LAILSLFNDD IIATDIQFDF VLENQRGMKL 
FGIPLYSKNS LLPLIDPSTY QSIKGKRLLI SADHLNNFPL PDFSWTWSWD SWYVLMCNDV
DDQGWVYSNL FFNNYFTDRT WKGKYYLGNF VRRRIWVRMR KKSEISGSDN RKGE