Gene PICST_28167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28167 
Symbol 
ID4850946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp526746 
End bp527153 
Gene Length408 bp 
Protein Length135 aa 
Translation table 
GC content48% 
IMG OID640392654 
Productpredicted protein 
Protein accessionXP_001387739 
Protein GI126273907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.994579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCA CGCTTCCGGA TCTCAGGTTC GAACAGACCT TCTACAAGCA GCTTCTGGCC 
AATGCTGGCA AGAAGTATCC TGAAGGCAAT AGTCTTAGCG ACAAGGAATT GAAGCTGCTC
AGCAAAAAGA TTGACGAAGA AGAAGAGAGA ATAAGAGATA GCGGAGACAC GCATCACCAT
CCCGGCAGCC AAAATAATCA ATTGCAGCCC ATTGAGCCCA TAACCCCGTG GATAGTGATC
TACACCATAA TCAAGGACCA GATGTTCTTC CCACTATTGC AGGGCTTCTT GTGGACCGGT
GTTCTTATAA GCTTGAGGCC GTTGATGAGG CTAGCAGTGA AACAGGGCCA GCATGCTGGA
ACCTGGGTGG CCAATCTTGT TGGGTTGAAT GCCATTCATC GTAGATAG
 
Protein sequence
MSFTLPDLRF EQTFYKQLLA NAGKKYPEGN SLSDKELKLL SKKIDEEEER IRDSGDTHHH 
PGSQNNQLQP IEPITPWIVI YTIIKDQMFF PLLQGFLWTG VLISLRPLMR LAVKQGQHAG
TWVANLVGLN AIHRR