Gene PICST_28162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28162 
SymbolTUB4 
ID4850941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp504149 
End bp505276 
Gene Length1128 bp 
Protein Length375 aa 
Translation table 
GC content43% 
IMG OID640392649 
ProductGamma tubulin 
Protein accessionXP_001387736 
Protein GI126273902 
COG category[Z] Cytoskeleton 
COG ID[COG5023] Tubulin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0897404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAATC CTCGTAATAT TCATCTCAGC GAACAGGGCA GTGGAGCTGG AAATAACTGG 
AAACACGGGT ATGAGTATGG CCAGGAAAAG GAAGAAGAAT TGCTTAATTT GATCGACAGA
GAAGTGGACA AATGTGACAA TCTTGCCAAT TTCCAGCTCT TCCATAGTGT AGCGGGAGGA
ACTGGATCAG GTGTAGGATC TTTGCTTCTT GAAAAGTTGA GTGACAGATA CGGCAGCAAG
AAGCTTATCA ACACTTTTCT GATTTTTCCC TCCAACGAAA AGACGTCGGA CGTTGTTGTT
CAGCCATATA ACACAGTTTT GACTTTACAC AGACTAATCG AGTACAGTGA TGCTACGTTT
GTGTACCACA ACGACGCCTT GAATTCGATC CAGAACTTGC TCTTCAATAC TCATGGAAAC
CACGGCGATG GCTATGATGG CGCAAATAAG TTGATTGCCT ATGTTCTGGC CAGCATATCA
AATCCTTTGC GGTTTCCTGG GTACATGTAT AGTTCTATTG AATCCATACT TTCTACGTTG
GTACCTACGC CAGACTTGAA GTTCTTGACG ACATCGATTT CTCCATTCGC ATCCCAGACG
AACAAGCATG TGTATTCAAA CGAATACGAC ACTATCTTAG AGCTTCTCAA CGACAGATAC
AAGATGAACA GAGTAGACCA GCCTGTGCAG TACACATCAA TGCTTAACTA TTTGATAGGC
AACAACCTAG ACCATCTGGA AATCAGAAAG GGTACAATCA AAGCCCAGCT GAGAGTCGAC
TTTGTGCCCT GGGCTCCTAC CTCTATACAA TTGGTACATG GCAAGAAATC GCCATTCCTA
CAGGCTAAAG AAAATGGACA AAAGAATATC AGTGGAGTAC AAGTCTCGAA CAATACGTCC
ATAGTGCTGG TATTCACCAA GATATTGAAG CAGTACGATC TTTTGGCCAA GCGAGAAGCA
TACGTCAACT CCTACACTGG GTCCAAGGAT CGACTGGAGA TTGCCAAAGT AATGGAGATG
TTCAACGAAT GTCGAGAAAG TGTTGCTAGT GTTATCGAAG AGTACCGAGC ATGTCAGAAT
GTAAACTACT TAGAGGATGA GATTCTTGGA GACGATCAGG TGATGTAG
 
Protein sequence
MYNPRNIHLS EQGSGAGNNW KHGYEYGQEK EEELLNLIDR EVDKCDNLAN FQLFHSVAGG 
TGSGVGSLLL EKLSDRYGSK KLINTFLIFP SNEKTSDVVV QPYNTVLTLH RLIEYSDATF
VYHNDALNSI QNLLFNTHGN HGDGYDGANK LIAYVLASIS NPLRFPGYMY SSIESILSTL
VPTPDLKFLT TSISPFASQT NKHVYSNEYD TILELLNDRY KMNRVDQPVQ YTSMLNYLIG
NNLDHLEIRK GTIKAQLRVD FVPWAPTSIQ LVHGKKSPFL QAKENGQKNI SGVQVSNNTS
IVLVFTKILK QYDLLAKREA YVNSYTGSKD RLEIAKVMEM FNECRESVAS VIEEYRACQN
VNYLEDEILG DDQVM