Gene PICST_28132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28132 
SymbolPIS1 
ID4850912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp417208 
End bp417846 
Gene Length639 bp 
Protein Length212 aa 
Translation table 
GC content44% 
IMG OID640392620 
Productphosphatidylinositol synthase 
Protein accessionXP_001387722 
Protein GI126273873 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.619902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAG TCACAGTAAA CGAGATCTTC CTATACATTC CCAATCTCAT TGGTTACTTC 
AGGATAATAG CAGCTGTATT GTCTTTTTTG TGCATGAAGA ACCACCAGCT TCTCACCCTC
ATCTTTTATG GTATATCAGG ATTTTTGGAT GCCTTCGATG GCTATGCAGC TAGAAAGTAT
AACCAGGGAA CTAGATTTGG CGCCGTGTTG GACATGGTCA CTGACAGATG CGCTACTTCG
TCGTTGATCG TGTACTTGGG CACCCTTTAC CCCAAATATA CCTTTTTCTG GCAACTTCTC
GTATCGTTAG ATTTGGCTTC TCACTACATG CACATGTATG CCATGTTGAG TTCAGGCTCC
ACTTCTCACA AGAACGTCGA CTCTACCCAG TCTAGGATTT TATCGTTGTA CTACACAAAC
AGAACAGTCT TGTTCTTTGT TTGCCTTGCA AACGAGGTAT TCTACGTAGC CATCTACTTG
CACTACTACA ACTGGTTCTG GTTGGGCACC TTCATGGTTT ATTTGAACGC TCCCATCTGG
TTATTCAAGC AGTACACCAA CGTCGTTCAG TTGAAGAGTG CATCACTCAT TTTGGCTAGA
ATGGATGCCG AAGACAAATC GAAGTCTAAG TCCACATAG
 
Protein sequence
MSKVTVNEIF LYIPNLIGYF RIIAAVLSFL CMKNHQLLTL IFYGISGFLD AFDGYAARKY 
NQGTRFGAVL DMVTDRCATS SLIVYLGTLY PKYTFFWQLL VSLDLASHYM HMYAMLSSGS
TSHKNVDSTQ SRILSLYYTN RTVLFFVCLA NEVFYVAIYL HYYNWFWLGT FMVYLNAPIW
LFKQYTNVVQ LKSASLILAR MDAEDKSKSK ST