Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28132 |
Symbol | PIS1 |
ID | 4850912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 417208 |
End bp | 417846 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | |
GC content | 44% |
IMG OID | 640392620 |
Product | phosphatidylinositol synthase |
Protein accession | XP_001387722 |
Protein GI | 126273873 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.619902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAG TCACAGTAAA CGAGATCTTC CTATACATTC CCAATCTCAT TGGTTACTTC AGGATAATAG CAGCTGTATT GTCTTTTTTG TGCATGAAGA ACCACCAGCT TCTCACCCTC ATCTTTTATG GTATATCAGG ATTTTTGGAT GCCTTCGATG GCTATGCAGC TAGAAAGTAT AACCAGGGAA CTAGATTTGG CGCCGTGTTG GACATGGTCA CTGACAGATG CGCTACTTCG TCGTTGATCG TGTACTTGGG CACCCTTTAC CCCAAATATA CCTTTTTCTG GCAACTTCTC GTATCGTTAG ATTTGGCTTC TCACTACATG CACATGTATG CCATGTTGAG TTCAGGCTCC ACTTCTCACA AGAACGTCGA CTCTACCCAG TCTAGGATTT TATCGTTGTA CTACACAAAC AGAACAGTCT TGTTCTTTGT TTGCCTTGCA AACGAGGTAT TCTACGTAGC CATCTACTTG CACTACTACA ACTGGTTCTG GTTGGGCACC TTCATGGTTT ATTTGAACGC TCCCATCTGG TTATTCAAGC AGTACACCAA CGTCGTTCAG TTGAAGAGTG CATCACTCAT TTTGGCTAGA ATGGATGCCG AAGACAAATC GAAGTCTAAG TCCACATAG
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Protein sequence | MSKVTVNEIF LYIPNLIGYF RIIAAVLSFL CMKNHQLLTL IFYGISGFLD AFDGYAARKY NQGTRFGAVL DMVTDRCATS SLIVYLGTLY PKYTFFWQLL VSLDLASHYM HMYAMLSSGS TSHKNVDSTQ SRILSLYYTN RTVLFFVCLA NEVFYVAIYL HYYNWFWLGT FMVYLNAPIW LFKQYTNVVQ LKSASLILAR MDAEDKSKSK ST
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