Gene PICST_28102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28102 
Symbol 
ID4850884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp328667 
End bp329242 
Gene Length576 bp 
Protein Length192 aa 
Translation table 
GC content44% 
IMG OID640392592 
Productpredicted protein 
Protein accessionXP_001387711 
Protein GI126273844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.490361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCA AGCCCTACCT TCCAAGTATG GGCAGTTTCT TGAATGTCAT TACCTCGCCT 
ATCTCAGGCA GATACAAGCC GGCCACTCAG TCGGAGTCTC TGGATTCAAT ACCCGAAGAC
AATCATCCGG TGACAATGTC GCTAGATTTA GCCAATACTG TTGTTTTCCA GAAGGGGATC
AACAAGGAAG AGAAGATGGT TAGTCCTCCT AAGACTATTC TGGGAGACAT CGTCGTCTAT
GTCTTTACTC CGGCCAGACT CTGTCACCTA AAAATTGAAT TCCGGGGTAA AAAGTATATC
ACACTCCAGA AATCTGCGTA TCACAACACT CAATCTCCTT TAGTCAAATG TCGAACTCTA
GTTTACGACA CTGTACTCTG GAAACAAGAA GACGTACTTC CTATAGGGAT TTACAACTAT
AGTTTTACCT TTGTAGTAGA GCCGTCGCTT CCAGAAACTG TAGACACTGC TAATCTCCAG
ATCCACTACG AGCTAGATGT CTCCATGAAA TATACGTTAC CGTCTTCGAA TAGTCAGAAG
TTGAAGACGA TCCGGAGATT CAAGGAAGTG CAGTTA
 
Protein sequence
MNSKPYLPSM GSFLNVITSP ISGRYKPATQ SESLDSIPED NHPVTMSLDL ANTVVFQKGI 
NKEEKMVSPP KTILGDIVVY VFTPARLCHL KIEFRGKKYI TLQKSAYHNT QSPLVKCRTL
VYDTVLWKQE DVLPIGIYNY SFTFVVEPSL PETVDTANLQ IHYELDVSMK YTLPSSNSQK
LKTIRRFKEV QL