| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28080 |
|---|
| Symbol | |
|---|
| ID | 4850862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 263180 |
|---|
| End bp | 263869 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | 640392570 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001387700 |
|---|
| Protein GI | 126273760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA CGGGCCAACC TGCCACTCCA GTAGCGACTC AATCGCCTCC AGCTACACAT
TCAATTCCAT CTACGACAGA GAAATCACAA GGTTCCTCTG TAAATTCACA AGTGTCACAG
ACCTCAGCTA AATCAAAGAA CTCTCCCAAA TCACAGACGA TTCAGTTCGT TTCATTCATC
TCCAGAAACG ACAAGCCATT GTATATCCAG TCTTTTGGAC TCGTTCTGAG TACTTCCAGC
GAGTCAGACT CCTCGTCTTC GCCGAGTTTC GATGCTGAAA ATGCCAACAA ATTTCTCAAG
TACAACTTTC TTTCACATAT GGCTCTAGAT ATATTTTCAT CGCCTGCTTC TCTCAGCATG
AGAGAACAGC AATCGCATCT GGCAGAGGCC GCTTCCGGAG TCCTTCTTCT TTTCATCCAA
GACGAGATCG CCGTTTACGG CTATGAAACA AACAACGGCT TGAAAGTTGT TGTTGGAATC
AGCAACTCTC CGTCAATATC AGAGAGTAAT TCGCATCGTA ACATCAAGAA TTTGTTTCTC
GATATCCAGA AGTGCTATTT GAGGACGATT TGTAACCCCT TCAATAATTT GGGATCAGAT
GTAGACATAA ACGAGAACGA AACCATTCTC CAGACACCGA CGTTTGACAC CAATATCAAG
AGAATTGTCA ACAGATGGAA TGAGCTCTGA
|
|---|
| Protein sequence | MSETGQPATP VATQSPPATH SIPSTTEKSQ GSSVNSQVSQ TSAKSKNSPK SQTIQFVSFI
SRNDKPLYIQ SFGLVLSTSS ESDSSSSPSF DAENANKFLK YNFLSHMALD IFSSPASLSM
REQQSHLAEA ASGVLLLFIQ DEIAVYGYET NNGLKVVVGI SNSPSISESN SHRNIKNLFL
DIQKCYLRTI CNPFNNLGSD VDINENETIL QTPTFDTNIK RIVNRWNEL
|
|---|
| |