Gene PICST_28046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28046 
Symbol 
ID4850831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp181411 
End bp182124 
Gene Length714 bp 
Protein Length237 aa 
Translation table 
GC content42% 
IMG OID640392539 
Productpredicted protein 
Protein accessionXP_001387686 
Protein GI126273616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.18282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCA GAGATTCCAC CTATTCGTAT GTCCATATAG ATGACCCCAA TCAGGTGATA 
TACATGGAGA AGTGGCAGGA TGACCCGATT CCATTTGACG ATATTGATAC ACAGCAGTTG
CTAGAAGCTA CAGCCAATTT GTTCCCTCAG CTTTTGTTAG AGGAAGAGGA AGATGGGGCC
ATACCGATTC AGCCTGCCAC ATATGGAGCA AAGGCATACA AGAATCGACA ATTGTTGAAG
GATAAGATCT GGAATGACTT TGGCATTTTT GAGAAGTTTC TCAACGAATC GAGTTCACTT
AACAAACAGG TTGATAAGAC TATACTAGGA TCGATGTACA CGAAAAGTAA TGAGCATTTT
GATGGAGATA TAGCCGATGG AGGCGAGGAT ATCGTCAAAA GAGAAAACGG CTTCACAGTA
GCAGATTATC TTTCTAATGG GTTCACAATG AACGACAACA CAATGGATAT ATTATCACCG
ACTGATATGG CTAATGATAG CATAATGGGG GTTCACCATG GAGATATCTC ATTGAACTCG
ACATCAGATC TTCCAGGAGG AGCCAACAAT ACGTTTTTCA ATGCCAGATC CAACTCAATA
GGGTATGGCA ATCAAGCAGG AGTTGCGGCT GTGCAGACCC CACGAGTAGG AAGAACCAGA
CAAACATCTA CCGATAAAAG TTTCCAAACA CCCATTACAA GAATAATGAG GTAA
 
Protein sequence
MSTRDSTYSY VHIDDPNQVI YMEKWQDDPI PFDDIDTQQL LEATANLFPQ LLLEEEEDGA 
IPIQPATYGA KAYKNRQLLK DKIWNDFGIF EKFLNESSSL NKQVDKTILG SMYTKSNEHF
DGDIADGGED IVKRENGFTV ADYLSNGFTM NDNTMDILSP TDMANDSIMG VHHGDISLNS
TSDLPGGANN TFFNARSNSI GYGNQAGVAA VQTPRVGRTR QTSTDKSFQT PITRIMR