Gene PICST_27989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_27989 
SymbolADD2.4 
ID4850777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp14883 
End bp16892 
Gene Length2010 bp 
Protein Length669 aa 
Translation table 
GC content42% 
IMG OID640392485 
ProductATP-dependent DNA helicase 
Protein accessionXP_001387245 
Protein GI126273509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA ATGAGATGAT GGCAGCACAA AAACCAAGAG TTGTTGGAAT GCCTCAAACT 
AGTTACAACT GGGATCAAAG GGATATCGAC AGATGCTTGG AAATTAACCT GGTTGATAAG
TTTGACATCA AGAGTCTTCA GTATTTCCGT CGCCGACTCT CTAGATTGAA CGACTTGTTT
TTTTACATGA TCTTGTTGAC GTGTGGGTCT CCGTATCGTT TAACGGAATT ATACCTGGTT
CTTATTCGTA ATGAAGAAAG ATTGGGAAGT AATGTGTTTG TTGCTGATGG GATGCTTGGA
CTCTTTACCA ACAATGGAAA GAACAGTATG AAGTATAGTC GAGAACGTCC TATTCTCAAG
ATGTTGCCCG AAGAGGTGTC AGAGTGCTTG GCTCACTATA TCTATTTTGT CCGGCCATTC
GAACACACTC TTGTCGAATA CCAAGAACAA ACCGGTTCAT TGAGCCACAC AGAGTTCAAG
AAACTAAGTG ATAAATACAA GCTCCATTTG TTCGTGGGAG AGAAACAAAT CAAAAACAGC
ACTACTCTTG GAAAATCGTT CCGTAAGTTC ATAAATAAAA CAACTCCAAA GCTTAGAGGA
ATCATGTACG GTGAAATAAG ACAAGTGCTT TCATATTTTG TTGGGGCGAA CGTCTCTGGG
ATGATTGGAT TACAGATCAA GATTGACAAC ACCCTTGCCG AACAGGCTGG GCATTCGTTT
AGTAGGTTTG TCGAAAGTTA CGCCACAAAT AGAGATGGTT ACAATCATGT AATGCTTCAA
CGAATGAGAG ACTGTCTGGC AGCCTGGCAT ACGTGTTTGG AGATGAGTAC TCTTCAGATA
TTTACGCCTA GCGTATTTAC TAGGAACGAA CCACCGAAAT TGACAGGTGA AGAACTTATA
GAGGCTGGCA GACAGATGTT TGGACAACAC TTCAAGTTCA AGGATGGCCA GCAACAGGCT
ACATCGGATG TGGCCAATTG CTTCAGTATG ATGGTGGCTA TTGACCTGGG TAAGACGACT
TGTTGCATTA TTGCGATGTT GGCGGAGCGT ACCCACAGTC TTCGCCAGAC CGACCGAGGT
AAAAAGACTC ACTGTGTTAC GATATTTGTG GTACCTTACA TTTCTACACT CAACTCCACC
ATCCGCCAAT TGACCGAAAA TTTCAATGTG CGTACGTTTG ATGGCTCTGT TGGACAGGTC
AACGACTATG ATGTGCTATT GATGCTGCTT GAAGACGGCC ACCTTAGATA TCTTAATCAG
GTAGTCAGAC ATTTTCAGTC TACGAACTAT CAAGGCAAGA CCTATCTCCG CCGGGTAGTG
GTTGACGATG CCCATATCTT GCAGATGAAA CAATATGTGG TCGATGGAAA CAAAAATGTA
CCTGTTGTAT TTTTGACGTC ATTTCTTCCA CAGAAGGAAG ACGCTACGAT GAGTAGATTA
TTTAATATCA ATTCCTTGGT AAGAGTGTCG TCACAGGAAC CACTCTTACC ACATAAAGAA
TTCACTCTTT TCAAGAAGCC TAATACCACT TCAATATGTC AGACGGTTCT AGAAAAAGTT
AGGAGTTTCG GTTCGGCAAT TGTGATTGCT GAGTCTTCTG ATAAAGTGTC ATACTTGGTA
AGTCAAATGG CCGATGAGGT TCCATGTATA GGTATCTACG GATCCCCAGT CAGCAGAACA
GCTGCTTTGA ATAAGATGGC CAGTGAGAAT ATCAGGGTTG TGGTTACTAC GGCAGAAGCA
GTGGTGGGTC TTCATATGTT GAAACCTACA ACCGTCTTGT TTGCATATTC GATTAATAAT
CCAATAGAAT TGCTTGTTGG CAGTCAAATG AGCAGTGGAA AGGTAGACAT GGTATTGCTC
AACTTTTATT CGTCTGAGTT TCAACGAGAC TTGTTGGATA CTTGTGTTAA TTTAATGGTG
ACGAGACATA TGCGTTTAAC GGAACAAACT TGTTATGAGG CTGGTAAGGA GCGGTGTCAT
GCTTGTGTCA AAAAGAGAAG ACATGCTTGA
 
Protein sequence
MAMNEMMAAQ KPRVVGMPQT SYNWDQRDID RCLEINLVDK FDIKSLQYFR RRLSRLNDLF 
FYMILLTCGS PYRLTELYLV LIRNEERLGS NVFVADGMLG LFTNNGKNSM KYSRERPILK
MLPEEVSECL AHYIYFVRPF EHTLVEYQEQ TGSLSHTEFK KLSDKYKLHL FVGEKQIKNS
TTLGKSFRKF INKTTPKLRG IMYGEIRQVL SYFVGANVSG MIGLQIKIDN TLAEQAGHSF
SRFVESYATN RDGYNHVMLQ RMRDCLAAWH TCLEMSTLQI FTPSVFTRNE PPKLTGEELI
EAGRQMFGQH FKFKDGQQQA TSDVANCFSM MVAIDLGKTT CCIIAMLAER THSLRQTDRG
KKTHCVTIFV VPYISTLNST IRQLTENFNV RTFDGSVGQV NDYDVLLMLL EDGHLRYLNQ
VVRHFQSTNY QGKTYLRRVV VDDAHILQMK QYVVDGNKNV PVVFLTSFLP QKEDATMSRL
FNINSLVRVS SQEPLLPHKE FTLFKKPNTT SICQTVLEKV RSFGSAIVIA ESSDKVSYLV
SQMADEVPCI GIYGSPVSRT AALNKMASEN IRVVVTTAEA VVGLHMLKPT TVLFAYSINN
PIELLVGSQM SSGKVDMVLL NFYSSEFQRD LLDTCVNLMV TRHMRLTEQT CYEAGKERCH
ACVKKRRHA