Gene PICST_27132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_27132 
Symbol 
ID4851109 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp956392 
End bp957018 
Gene Length627 bp 
Protein Length187 aa 
Translation table 
GC content40% 
IMG OID640392817 
Producthypothetical protein 
Protein accessionXP_001387818 
Protein GI126274095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.351185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GACACCAAAC AGCTCACAAA CATATATAAG AAAAATGGAT CGTTTGACAA ACAGCGACGT 
CAACTTCTAC AGAACTTCAA GCAATCAGAA ACGCACGCCA ATCTTCTTCT CAAACTCAAG
GTGATGATAG AGAACAAAAT CAATCAGGAC CCTTCTATTC TTATGAAGAA TAAAGGAAAA
ATGGGAGCAC TTATTCAAGG AGAAATCATC AATGAACATT TGGCTAGCAA ATCCAATTCC
ACTTCTGGTA GTGGATCTAA TTCCAACTTT GAACTGACGA TTCCAGCGGG AAGCGGGCTT
TTAAGTATTG TAGATAAGGA TATCCAGGAT AAAATCATCG ATTCTCCTGA TTTCCACAAG
TTGGTTAGAG ATGAGTTGAA GGACATAAGG CGTATTCTCT TGGGTATAAG TGACGAGGAT
TACCAGAAAG AACTTCGGAA GGAAGCAGAC GAAGAACGCG AAAAACAAGA AAGACTCAAG
GCCGAAGAAA CAGCTAATAC CGTTTCGTCT ATTTCGTCTG CTACGGAGAA GGATTATAAG
AATAACTTTA GAGTGAAAAG TTTGACAAAT ACTCATAGAA TCGCCAAACC CCCAAGGTTC
AATTTTGGAG GTAGAAACGG CCGTGAT
 
Protein sequence
DTKQLTNIYK KNGSFDKQRR QLLQNFKQSE THANLLLKLK VMIENKINQD PSILMKNKGK 
MGALIQGEII NEHLASKSNS TSAGSGLLSI VDKDIQDKII DSPDFHKLVR DELKDIRRIL
LGISDEDYQK ELRKEADEER EKQERLKAEE TANTKDYKNN FRVKSLTNTH RIAKPPRFNF
GGRNGRD