| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_26963 |
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| Symbol | RPL8A |
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| ID | 4851088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 900810 |
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| End bp | 901568 |
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| Gene Length | 759 bp |
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| Protein Length | 253 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640392796 |
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| Product | 60S ribosomal protein L7A |
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| Protein accession | XP_001387812 |
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| Protein GI | 126274074 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1358] Ribosomal protein HS6-type (S12/L30/L7a) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.546499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAGC CTGCCAAGAA AGTTGCTCCA GCTCCATTAG CCACCAAGTC TAAGGCTACT
GCCTCTACTA AGAACCCTTT GGTTGACTCG ACCCCAAAGA ACTTTGGAAT CGGTCAATCC
ATCCAGCCAA AGAGAAACTT GTCTAGATTC GTCAAATGGC CAGAATACGT CAGATTGCAA
AGACAGAAGA AGATCTTGTC TTTGAGATTG AAGGTTCCTC CTGCTCTTTC CCAATTCCAA
AACACTTTGG ACAAGAACAC CGCTGCTCAA GCTTTCAAGT TGTTCAACAA GTACAGACCA
GAAACTGCTG CTGAAAAGAA GGAAAGATTG ACCAAAGAAG CAGCTGCTGT TGCTGAAGGT
AAGTCTGCCA AAGATGCTTC TCCTAAGCCA GTTGTCGTTA AGTACGGTTT GAACCACGTT
GTCTCGTTGG TTGAAAACAA GAAGGCCAAG TTGGTTTTGA TTGCCAACGA CGTCGATCCA
ATTGAATTGG TTGTTTTCTT ACCAGCCTTG TGCAGAAAGA TGGGTGTTCC ATATGCCATT
GTGAAGGGTA AGGCAAGATT AGGTACTTTG GTCCACAAGA AGACTTCCGC TGTCGCTGCT
TTGACTGAAG TTTCTGCTGC TGACGAAGCT GAATTGTCTA AATTGGTTTC TACTGTCAAC
GCCAACTTCA TTGAGAAGTA CGAGGACTCC AGAAGACACT GGGGTGGTGG TATCATGGGC
TCCAAGGCTA ACGACAAGAT CGCCAAAAGA GCCAAGGCC
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| Protein sequence | MTQPAKKVAP APLATKSKAT ASTKNPLVDS TPKNFGIGQS IQPKRNLSRF VKWPEYVRLQ
RQKKILSLRL KVPPALSQFQ NTLDKNTAAQ AFKLFNKYRP ETAAEKKERL TKEAAAVAEG
KSAKDASPKP VVVKYGLNHV VSLVENKKAK LVLIANDVDP IELVVFLPAL CRKMGVPYAI
VKGKARLGTL VHKKTSAVAA LTEVSAADEA ELSKLVSTVN ANFIEKYEDS RRHWGGGIMG
SKANDKIAKR AKA
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