Gene PICST_26814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_26814 
Symbol 
ID4851850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3007378 
End bp3008133 
Gene Length756 bp 
Protein Length252 aa 
Translation table 
GC content42% 
IMG OID640393558 
Productpredicted protein 
Protein accessionXP_001387142 
Protein GI126275783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCA TTATACTCAA ATACATTACC AACCGAATCC TCAAGGACAA CCAGTGGAAC 
CGGCTTGGTG TGGAAGACCC ATACCATGAG CTTGTGCCTA TAAATGTAGT CAATGGAGTC
ACCAAGTATA AGAAGGTGAA TAGAAGGCTC CCCGATGGAA TCAGTTCCAA TGATCTCAAT
GTGCTAGAGA AATTCAAGAA ACGAGCTCAT AGATACGATA TGATGTTCTC CTTTTTTGGT
GTCACTTTTG GCTGGTCCAA TATTGTTGGC ATCATTCCCA TTTTCGGAAC AATTGTCACG
ACATACTGGT CGCTTGGGTT GTTGCAATTG GCCAGGAAGT TGGATGATGG GTTTCCACTT
GATATCCAAA TCTTGTTTCT CGTAAACATC TTGATAGACT TCGTTTTTGG TTTAATTCCA
ATTGTGGGAG ACATCATTGA AATCGGCTAC AAGCTGAATC TGAGGAATTA TCTCTTGCTT
GAAAAACACT TGGACAGAGT AGGGCAGAAA AACCTTGGTA TTATCACAAA GGAGGAAGTT
AAGCCTGGCT TCATCAACGA TAAGATTCAG CCGTATATAG ACAATACCTT GAAGCCCAAT
GCAAAGAAAG CAGGAGATCA GTTCAAGGCA TATTTGCAGA AGACCAATGG TCATAGTAAA
GAGTCTTCAG AAGGTTCCCT GTTCCAACCT TCCTTAAATA GCTCACCTAG CACCCACACC
AGTTCTACAA CTGTAGTTAC GTCTGCCACA GATTCA
 
Protein sequence
MSSIILKYIT NRILKDNQWN RLGVEDPYHE LVPINVVNGV TKYKKVNRRL PDGISSNDLN 
VLEKFKKRAH RYDMMFSFFG VTFGWSNIVG IIPIFGTIVT TYWSLGLLQL ARKLDDGFPL
DIQILFLVNI LIDFVFGLIP IVGDIIEIGY KLNLRNYLLL EKHLDRVGQK NLGIITKEEV
KPGFINDKIQ PYIDNTLKPN AKKAGDQFKA YLQKTNGHSK ESSEGSLFQP SLNSSPSTHT
SSTTVVTSAT DS