Gene PICST_24134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_24134 
Symbol 
ID4851834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2956771 
End bp2960040 
Gene Length3270 bp 
Protein Length1090 aa 
Translation table 
GC content38% 
IMG OID640393542 
Productpredicted protein 
Protein accessionXP_001386899 
Protein GI126275742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000713013 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
AGACCGATTT CAACTTTGGC TACAGATCCA CGAAAGGTGC TACGAAAAAA TACACTTCAA 
GGTGACTATT ACCAAGTGGG AACGCTTTTG GAGGATCCGT CTTTGAAAGA TGAGTACCTT
AATGCTCTCG AGGTAGCTGA AACTTTTCTG GATGTAGAAA TCGACTTGAT ATCTGCCAAT
TACAGCAATC TTTTGGAAGT GATGGCTGGA TTCCGCGAGA AAGAAGCCCT AGATCTACTT
GTTGATATAT GGACAATAGT TTTCAACAAG AAGGGAAGAA AAATCAAGTC AGCCCGTAAG
TTGCAACAGT CATTGCTTCA GAAAAGACAG CAGCTCGTTG ACATATTGAT GGATGCTAGA
CGCTATGACA TATACGAAAC CCTTATACAA CCGCTACTAG AGGATTCTTC ATTCAGTGAG
AAACGTACCC AGTCAGACGA CTTCATGATA ATTTGTCAGT TGAAGTACCA AGATGGGAAG
CTACTGCTCA ATAAGCATGG TATATTGCGT TATTTGAGAG ATGAATATAT ACCCATGCAC
AAGAAAAGGC AGTTTCTTGA GCGACTTACA CGTTCCGGAA TAATTTATGC TTCCAATGAC
GAGGAGCGAT ATTTATTCAT CAAATACTTC ATGGAGTTTT CCAAAGTGAT GGGAGATATC
GATATGAACT TCGTAGACTC GCAATTTAAG GTATACGAAA AAGTATTGCG TCTCATGGCA
ATTCCTCCAG AAGGATTCGA ACAGCATATC ACGGAGCTTT ATCACCAGTT TGTAAAGCTT
GACTTCGAAC CAGAAGCATT TAATAACTTG TTGACTTCAC TCATGAGTGC AACAGCATCG
GCTCCAAATT ATGTCTTGAA GTATTGGCAG TATAAAGTAA AGCACAGTCG TCAGATGGGT
TTAGCACCAT CCAGAGTATT GAACTACAAG GATTTGAAGT ACGCAATGCA GTCACTCTTG
TCTATGAATT ACCACAAAGA AGTAGAAGAA CTCTACTGGA ACTTTCCAAC TCTTCACGAT
GACGATCAAA TAGAAGTACT CTTGGAACTA TGTGCTGTCT CCAAGGATTG GGAGGGACTT
CAAAAGCGAT TTGAAGAAAT GTACGGTCGT GGTAATCTTC CTCTTACAGT CCATTATGCT
ATAGTCATGA ATGCATTGGC CACTGTTGGG GCCAAGCAAG AAGTCGATAA TCTTTTCCAG
CAACTCATAG AGAGAAAGCT TGAGGCATCA ACCTCTGTCT TCATTTCATT GATTAACAGT
AGACTCTACT ACAACGACAT CGATGGAGCA AAAAAATGTA TTGATTTATA CCTCAGTATG
TCGTTTGGAG AAAAGGAAAA GGATGCATTG CCCAAGTTGT ATCTGTTGAT TTTCGATGTC
TACATCAGAT CGAGTTCTTT ACAGGAAGTC ATGGACTTTT TCGAGTCCAC TTTGAAACGA
CAAGCAGAAC TTGGAGTTCA ACTAATCAAC AGCAAAGTCA TTGTACAAGT CATAGATATG
GCATCTTCCA ACTATGGATT GAGAGAAATA GAACGTCTTA AGAGTATTGC TGAATATTTG
AACTTGGGCA ACAATGAAGT TTATTTGGGG TTGATCAGAA CATATACGAG AATGGACCAA
TTTGAAAGAG CTGACGAAAT CAGTTACGAA GCTCATAGAC ATTCTGAAAT TCCTTTCAAT
GATTCCAAAG TATATGCGGC CCAGCTAAGA AACTTCAGAT TTTGGCAGAG GAGCTCCACA
CATAGTGAGA AAAGAGAATA CTATAGATCT AGAATGACAT TCATTAGTTT CTTAGCCGAC
GATGTTCGTT TGGAGAAGTC GCTAGCTCTC AATGCTGGTT TTTTCACTGA AGTAATCAAA
TATTTACTTT CAGAGGACAA TGTTAAAGAA GCATATGCCA TGTTGAGGAA GGTTGAAAAA
CTTGAGTTGC TTAGGGAAAC TCATTATGTA CCCTTTTTAA AATATTTCTC CAGGACTAGA
AATAGTAAGT CGAGAAATGA GGTTATGAAA CTCTACCAAG AGATGATAGA AAAGAATATT
ACTGTCTCTT CTCTTGCTTA TGTATTTTTA TTGAGAGTAC TGTTGGAGAC TGACCATGGA
CATGGTTTAG GGTTTAAGAA TTCCTTGAGT TTATTGGAAA CAGTTTTCAA ACTTCATGGA
ATAGCTTTGA CAAGAGGAGA GAAGTTGGAA CAACCACAAG TCCTGGCTTT AATGCTCTAT
CAGAACTATG TCAATCTATG TCGTATGCTT TCTGACTACA TAATTACTAC AAAGGGAGAT
TCTGATATGT TGATGCACTT TATGGAACAA GTCAGAAGTA AACTCGGAGA AGTTATTGGA
ATAGATTTCA CAATCACATC GTCTATTGAA ATGGCTAAGG TTTATGAAAG CGAGGGAAAC
AAGGTGAAAT CGCAAGGATT TATAGACTTT GGAATGGTGG ATTTGCGTCA CTTTATTTCC
AGATTTCATG CCAACTATCC ATTCAAAAAA TCAGAAGAAG TTGTTGTTCC GCGAGCATTA
CTGAAACCTT TGCGTACTCT TATTACCATG AAAATGAGAA CAGATCTGAG AGATGTCTAT
ATTGATATAC TCAACGAATC TCATGACTTA GTTACTCTTT CAGGTATCCA GTACAATCAG
TTGATGAAAG GTATCTTGCC AACTTCAAAT ATCAACATTT TGAATAAGAT CCTTTTTGCT
TGTGAACATC ACCTAGTTTC AGGTAACTGG GTTGAAATCC AAATAATGAA CAAACTTCAA
TATTTATACA AGTTGATCAT TTACCATCTA ATAAGACTTC ATGGAGAGAA TAAAGTTATG
TCTCGGTATT CGATATTGAA CAACTATTAC AACGTCAAAA GCCTTTCCCA GTTAGATTCT
GAGTTTGCAG AGCTTGAAGA TCCTTATGAA ACTTTGAAAT ATGAAGTCGA GACTCATATT
CGAAGTATTA CCACGAGGAA TTACTCGGTC GAAGATGTCA TCAGACATAT ACCAAAGATA
TTTGCTCCTG AAAGACACAT TAGAACAAGA AACAAGATAT CCCACACCAA CTCTTCACAA
CTCTGGTGGA ATATCAGTAA ACACTGCAAA GACGACATAC TCAAAGCATA CGACTTAATG
CAAGAGTATC CCAATCTCAT GGAGTACTTG ATGTACAATA ACAGCGCAAG ATACCGTATG
ATTTGTTTTC GAGACGAAAT CAACAAAATA AGGCCACCAA GATCAAGGGA GGGCTACAAC
GATAGACGGT TCCGTACAAT AAGTGCACTT
 
Protein sequence
RPISTLATDP RKVLRKNTLQ GDYYQVGTLL EDPSLKDEYL NALEVAETFL DVEIDLISAN 
YSNLLEVMAG FREKEALDLL VDIWTIVFNK KGRKIKSARK LQQSLLQKRQ QLVDILMDAR
RYDIYETLIQ PLLEDSSFSE KRTQSDDFMI ICQLKYQDGK LLLNKHGILR YLRDEYIPMH
KKRQFLERLT RSGIIYASND EERYLFIKYF MEFSKVMGDI DMNFVDSQFK VYEKVLRLMA
IPPEGFEQHI TELYHQFVKL DFEPEAFNNL LTSLMSATAS APNYVLKYWQ YKVKHSRQMG
LAPSRVLNYK DLKYAMQSLL SMNYHKEVEE LYWNFPTLHD DDQIEVLLEL CAVSKDWEGL
QKRFEEMYGR GNLPLTVHYA IVMNALATVG AKQEVDNLFQ QLIERKLEAS TSVFISLINS
RLYYNDIDGA KKCIDLYLSM SFGEKEKDAL PKLYLLIFDV YIRSSSLQEV MDFFESTLKR
QAELGVQLIN SKVIVQVIDM ASSNYGLREI ERLKSIAEYL NLGNNEVYLG LIRTYTRMDQ
FERADEISYE AHRHSEIPFN DSKVYAAQLR NFRFWQRSST HSEKREYYRS RMTFISFLAD
DVRLEKSLAL NAGFFTEVIK YLLSEDNVKE AYAMLRKVEK LELLRETHYV PFLKYFSRTR
NSKSRNEVMK LYQEMIEKNI TVSSLAYVFL LRVLLETDHG HGLGFKNSLS LLETVFKLHG
IALTRGEKLE QPQVLALMLY QNYVNLCRML SDYIITTKGD SDMLMHFMEQ VRSKLGEVIG
IDFTITSSIE MAKVYESEGN KVKSQGFIDF GMVDLRHFIS RFHANYPFKK SEEVVVPRAL
LKPLRTLITM KMRTDLRDVY IDILNESHDL VTLSGIQYNQ LMKGILPTSN INILNKILFA
CEHHLVSGNW VEIQIMNKLQ YLYKLIIYHL IRLHGENKVM SRYSILNNYY NVKSLSQLDS
EFAELEDPYE TLKYEVETHI RSITTRNYSV EDVIRHIPKI FAPERHIRTR NKISHTNSSQ
LWWNISKHCK DDILKAYDLM QEYPNLMEYL MYNNSARYRM ICFRDEINKI RPPRSREGYN
DRRFRTISAL