Gene PICST_12362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_12362 
Symbol 
ID4852031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3455419 
End bp3456441 
Gene Length1023 bp 
Protein Length341 aa 
Translation table 
GC content43% 
IMG OID640393739 
Productconserved hypothetical protein 
Protein accessionXP_001386991 
Protein GI126276359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GAACAATCTG AGACCATAGC CTTGGATCCA AGACCTGGAT TTGTGGTCAA GACCAAGATT 
GTGGATGCAC CCGATGTTCA GCTCATCGCA AGAAAGGTGT TTATAAACAT ATGTCACGAG
TCTAAAGTTC CACGACCCCA AATTGACTTT GAGCCTGAAA AAGTGTTTCC ACTCATCATC
GACAACCAAT GGGAGATTCC GATGATTGTA CTGGTTCAGA AGGAAGAAAA CGACAAAAAG
GGCTTTCCGC TGTTTGTGTT GGATTGTTGT ATCAACTCCG TGTGCTTCCA ATGGTGTCAG
GTGAATGCGG ATTTGCGCTC AATTCTCATC GAATGGAGTA TTGAGTGTGT TGAGATACTT
CATGGTTATG TTCTTGAGAG ACAGTATACA ATACCCAAGA TGATGTCCAA GGGCCAGTTG
TCACAGACAG AGGTGCCAGT TTCTGAGCTC ACTGCTTCTG CGCTCCAGGA GAAATGGAAC
AAGTTGAAAA GCAACGAAAC CTTGGGATTG ATCGAGGCAT TGAACGATCC AATGGATATT
GATGAAGGCG AAGTCGATAA TAAACCTCTT CCAAACTTGA TGAATATCTC GGGAACGCCA
AATGCACAAA AACAGAAAAT ACTAATCGAA GAGATTCCAG AGAAGCATAT AAAGAGTGTG
TCAAAAATCG AAGAAATAGT AGAAACAAAA CCAACATCGA AGTTACAAGT ATCGAAGAAG
TCAGAAATCC CAATAGAGCC TACTAGATAC GAGTTCAACG TAACCTATAC GCCGTTTCCC
GAGAATCATG ATAGCCAGTT GTTGGTTAAG TTCCACAGTG AGCAGATTAG CTCCGGATCT
GACTTGGATG TATTCTACGT GCCTAGCATT CACAGTATTC GAATTGTCAA CTTACTGGCT
AAACATTACT TCACGAAAGG ACTGAAAGAG GACTACGTGG ATCTTCCCTT GGCTGAAGAG
GTTATAGTAG ACACCAAAGT GAAATCGGCC ATTGTCATCG AGGACAACAC CTTGTATATA
CTC
 
Protein sequence
EQSETIALDP RPGFVVKTKI VDAPDVQLIA RKVFINICHE SKVPRPQIDF EPEKVFPLII 
DNQWEIPMIV LVQKEENDKK GFPLFVLDCC INSVCFQWCQ VNADLRSILI EWSIECVEIL
HGYVLERQYT IPKMMSKGQL SQTEVPVSEL TASALQEKWN KLKSNETLGL IEALNDPMDI
DEGEVDNKPL PNLMNISGTP NAQKQKILIE EIPEKHIKSV SKIEEIVETK PTSKLQVSKK
SEIPIEPTRY EFNVTYTPFP ENHDSQLLVK FHSEQISSGS DLDVFYVPSI HSIRIVNLLA
KHYFTKGLKE DYVDLPLAEE VIVDTKVKSA IVIEDNTLYI L