Gene PICST_11162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_11162 
SymbolMNN24 
ID4850894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp354771 
End bp356240 
Gene Length1470 bp 
Protein Length490 aa 
Translation table 
GC content38% 
IMG OID640392602 
ProductGolgi alpha-1,2- mannosyltransferase 
Protein accessionXP_001387715 
Protein GI126273854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.360349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCTAAGTCTC ACTATTTTTG GTACCAAGTT TTTGATGTCT TCGACAATAA CCGATTCGTC 
CCAAACAAAG ATTGGAAAAG TTTTCTTAAG GTCATTATTT TAAAGAGACC CACACAATGG
GGCAGGCATG ACAAAAAGGG ATTATTGGAG CACCAAGATC TTCCGCTTGA ACACAAGGAG
CAGTTGACAA AATTGCACGC AAACGTGTTG AGCCAACTTC CAGAAAATTT GGGAGCTGGA
ACCTATGTTC CTGGAACCAA AGGAATTGTC TTTGTTGGGG GTGGTATGTT TCTGTATTTG
GCATATTTGG CCATAGTACA ATTGAGAGAC AACGGATCTG AGTTGCCTGT TGAAGTTGCC
CTTCCAACAT TGGAAGACTA CAAAAATGAA TACGAGTTCT GTGAAAAGAA TTTATTAGCT
GTTGGTGCAA AATGCGTCGT CATAGAAGAC AAGTTTGGCA CTGCAGTCTC CAGAAAATGG
AAATTTTCTG GTTATCAATA CAAGGTAGCA GCTATTTTAA GTTCCACATT TGAAAAGGTA
TTTCTCTTTG ATGCAGATGT TATGACCCTC GCTAACCCTG ATTATTTGTT CGAATCAGAT
GTATTCAAAG ACCATGGCTT GCTCTTGTGG CCAGATTTTT GGTTCCGCCC ACATTCTCCA
GATTTCTACG AAGTGGCTAA ACTCCAAGTT AATGAAAAAC TTCGGGTTAG ATACAAACAA
TTTCCTCTCA TGCATTCAGT TGAAGTTGAC GAAAATGATA AGATCAACTT CCATGATAAA
GAAGGTGCTA TTTCAGATTA TTCTACAGAG TCGGGTGAAT TGATTGTAGA CAAAAAGTCG
CATGGAAAGA TGATGTTAAT GACCTTATAC TACAATTTGC TTGGACCTGA TATCTACTTT
GATTTCTTCA GTCTTGGGTC TTCAGGAACA GGAGACAAGG ATACATTTTC CATAGCTGCA
ACTGTTACCA ATTCTTCGTA CTATCAGTTA AAATCACTCC CCTACCAGAT GAGATTCATC
AACGACAAGC AGGAATCGAA GAAGATTGCC CATTTGTTGA AAGAACCTGT ACAAGATTAT
AAGTTGTTTA GAAGTGAAAT GGAAAGACTT CTGGAAATTG ATAGCAAGGG AGAATACTCA
ATGGAGGAAC AGATTGAAAT GCTTGCAGAA ACTGAGAAAA AATATTTTTC TCATGAAAGC
GAAATACCCA ATTTTTGCAT TCATTGTAAT TTTTACAAAT TTAACCCGTT CACGAAAGAT
GGACATGTCC AAGATAAACA CGAGAGGTTG TTGTACAGAG AATACAATAA TTTAACGTAC
ACAATTGAAG ATGAAGAGAT AGACTTCGAG TTGAAAAGAT GGTCCATTGT CAAGCAAGCT
TTATGCGACG ATAAGATACA GTTCTATGCT ATTCACGACA AAGACGTAGA TAATGCTTGT
CACTACGTCC AATCGACTAT TGATTGGTTA
 
Protein sequence
SKSHYFWYQV FDVFDNNRFV PNKDWKSFLK VIILKRPTQW GRHDKKGLLE HQDLPLEHKE 
QLTKLHANVL SQLPENLGAG TYVPGTKGIV FVGGGMFLYL AYLAIVQLRD NGSELPVEVA
LPTLEDYKNE YEFCEKNLLA VGAKCVVIED KFGTAVSRKW KFSGYQYKVA AILSSTFEKV
FLFDADVMTL ANPDYLFESD VFKDHGLLLW PDFWFRPHSP DFYEVAKLQV NEKLRVRYKQ
FPLMHSVEVD ENDKINFHDK EGAISDYSTE SGELIVDKKS HGKMMLMTLY YNLLGPDIYF
DFFSLGSSGT GDKDTFSIAA TVTNSSYYQL KSLPYQMRFI NDKQESKKIA HLLKEPVQDY
KLFRSEMERL LEIDSKGEYS MEEQIEMLAE TEKKYFSHES EIPNFCIHCN FYKFNPFTKD
GHVQDKHERL LYREYNNLTY TIEDEEIDFE LKRWSIVKQA LCDDKIQFYA IHDKDVDNAC
HYVQSTIDWL