| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4358 |
|---|
| Symbol | |
|---|
| ID | 4845484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 5098929 |
|---|
| End bp | 5100587 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640121636 |
|---|
| Product | transposon Tn7 transposition protein TnsC |
|---|
| Protein accession | YP_001052688 |
|---|
| Protein GI | 126176539 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAC CCAATCACTT TGTTATAGCG TCTTACCAGA CTACGGGCAT TAAGCGTTAC
GATGGTAATC CATTTATTGA AGCGCTTCCT CCTATATTGT CTGTTGCTCA AGCAGGCAAC
AGTATCAAGG GAAAGGTAGA TTTCCATCCT TCCGATCGAC TATCCAGTCC AAAATCCAGA
ATGCACATGG TCGTTTCGCT GTTGGATGAT TATTTCCAGC CACTCTCACA ACATGTACTG
TTGCAAGAGA AAATCGACAT GATGTTACGT ATGGGGTATG TCGGTCGAAA TATCAGCGAC
GGTTCACTAA ACAGGAAACT TCAAGAAGGC TATGATCTGA TCAAGTCAGG CGGAGAAATT
ACTGCAAATT TTAGTGTTGA AAAAACAACA GCTAGAAGCA TGTCTTTAGT GGGTATTTCT
GGCAGCGGTA AAACCAGTTC TTTAGTACGG GTGCTGGAAA CTTATCCGCA AGTTATCTAC
CACGAACAAC AAAACTTTTT TCAAGTGACT TATTTAAAAA TTGAATGCCC TAGTAACGGC
GATCTTGAGA GTCTTTGTCT GAATTTCTTC AGTGCTGTTG ATGGTGTACT GGGCACTGAT
TATGAACGCC GTTATGCAAA ACAACGTCTT TCTGTTCCTA AAATGCTGGC TCTGATGCGT
CAAACTGCTA ACAATCGTGC AATTGGAATT TTGGTTATCG ACGAAATCCA ACGCTTAAGC
CAGGTGCGTT CTGGCGGCAA GGAGCAAATG TTGGAATTCT TTGTCGAGCT AGTGAATACA
GTCGGCATCC CTATTGTTTT AGTTGGCACA CCCAAGGCTC GCCCAATTTT CGAGTTGGAA
TTACAGTCTG GAAGGAGGAG TGCAGGCCTT GGTTCAATAT ATTGGGAAAC CATACAACAA
AATGTAGCTA AAAGTAGCGG AAAGGAACCA AACCTAAATT GGACTCGATT CTCTGATAAC
CTTTGGAAGC ATCAATGGTT AAAACACGGA GATGATCCAC TCACTGATGA GATTAGAGAT
TGTTGGTATG ATCTATCACA AGGGGTACTA GACATTGTTG TAAAGCTTTT TGTGCTAGCT
CAACTTCGTG CAATAGCTAA TAAGAAAGAG CGCATCACTG TTGGTATATT AAAATCGGTA
TACAAGCAGG AATTGAAACC CGTTCATCCA ATGCTTGATG CTTTGCGCTC AGGTGATGCA
GATAAAATTG TGAAGTATTC TGATATGCGT GTCGTTGATC TTGATAAACG TCTCATCCAA
CTTGGCTCTG AAATTATGGA GGTCGTTCAA AAACAAGAGG AACGACTTTT TGGCGGCAAT
CAGGAAGCCT TACGCTTGTA TAATGTGATT TTGCAAATAG AGGAAAACTT TGACGAGCAG
ATCGTCGTCA AACTCATTGA AAGGATTTTT GAAGAACATC CTGGACAAAG CATTCATGAA
ATGATTCCTA TTTTGGTTAA TTGGTATCAA TCGTATGAAG AACCTGCTCG GAAAGAAAAA
ACAAAAACTA AAATTAAGCA GAAAGACTGG CACGATTTAG ATGTTAGTGA CTTAAGGTAT
CAATATGCCT ATTGTAAAGA AGAAAGACTA TCACTGGTAG AGAGGCTTGA GCAAAATGGC
CAGATGTTTG ATCTTGATGG CTGGGCGGCT GGCTTCTAA
|
|---|
| Protein sequence | MEQPNHFVIA SYQTTGIKRY DGNPFIEALP PILSVAQAGN SIKGKVDFHP SDRLSSPKSR
MHMVVSLLDD YFQPLSQHVL LQEKIDMMLR MGYVGRNISD GSLNRKLQEG YDLIKSGGEI
TANFSVEKTT ARSMSLVGIS GSGKTSSLVR VLETYPQVIY HEQQNFFQVT YLKIECPSNG
DLESLCLNFF SAVDGVLGTD YERRYAKQRL SVPKMLALMR QTANNRAIGI LVIDEIQRLS
QVRSGGKEQM LEFFVELVNT VGIPIVLVGT PKARPIFELE LQSGRRSAGL GSIYWETIQQ
NVAKSSGKEP NLNWTRFSDN LWKHQWLKHG DDPLTDEIRD CWYDLSQGVL DIVVKLFVLA
QLRAIANKKE RITVGILKSV YKQELKPVHP MLDALRSGDA DKIVKYSDMR VVDLDKRLIQ
LGSEIMEVVQ KQEERLFGGN QEALRLYNVI LQIEENFDEQ IVVKLIERIF EEHPGQSIHE
MIPILVNWYQ SYEEPARKEK TKTKIKQKDW HDLDVSDLRY QYAYCKEERL SLVERLEQNG
QMFDLDGWAA GF
|
|---|
| |