Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4347 |
Symbol | |
ID | 4845473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 5086759 |
End bp | 5088858 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640121625 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001052677 |
Protein GI | 126176528 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0558193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAG ATCAAGCTAA GCTCCACCTG CAAACTGCTT TGGCAAATAC TGACGCCGAT TTCCGTGATG GCCAATGGGA AGCGATTGAT GCTCTGGTCA ATCATCGGCA GAAATTGTTA GTGGTGCAGC GTACAGGTTG GGGTAAAAGC TCGGTTTACT TTATCAGTAC CAAAATTTTT CGTGATCGCG GCATGGGGCC AACCATTATC GTTTCGCCTT TGCTGGCGTT GATGCGCAAT CAGATTGAAT CTGCCGCGCG TTTAGGTATC GTTGCTGAAA CCATGAACTC CACGAATACC GCTGATTGGC AGGCGGTTAC TCAACGGATT CTTAATAATC AAATCGATTG TTTGCTGATT TCTCCTGAGC GGCTGGCCAA CGATAACTTC ATTGAAACCG TCTTACAGCC TATTGCCGAC CGTATCGCCC TGATGGTGAT TGATGAGGCG CACTGTATTT CTGATTGGGG CCACGACTTC CGCCCCGACT ATCGCCGTAT AGTAAATATC CTGCGCCAGC TACCCGCTAA CACACCGGTT TTAGGCACCA CTGCGACCGC GAATAACCGC GTAGTAGCCG ATATTCAAAC CCAGGTTGGT GACATTCAAA TCCACCGTGG CCCGTTAACT CGCGAAAGCC TTGCCCTACA AACCATGGTG TTACCCGATC AGGCGTCTCG CTTGGCCTGG TTAGTTCAAG TCATTCCAAC TTTACCGGGT ACGGGGATTG TTTACACATT AACAGTGCCC GATGCAGAGC AGGTAGCTAA CTGGCTCACT AATAATGGTA TTGATGCTAA GGCTTATCAT GGCAGCGTAG AGGCAGAAGG CTTTGAAAAT AGCAATACGT ATCGCCAGCA CTTAGAAGAG TTGTTACTCA ACAATCGGTT AAAGGTGTTA GTCGCCACTA CAGCCTTGGG TATGGGCTAC GATAAACCGG ATTTAAGTTT TGTTATTCAC TACCAAGCGC CGGGCTCTAT CGTTGGTTAT TATCAGCAGG TAGGCCGAGC AGGGCGTGGT ATTGACCATG CTGTTGGCGT ATTGATGTCT GGTGTGGAAG ATCAGGATAT TCATGAATTT TTCCGCGAGT CGGCGTTCCC ATCTGAGGCA CAGGTGAATG AAATTTTACA CGTACTGGAA CAAAGCGATG GTTTGTCATT GCGCAGTATT GAAGAGCAAA CCAACCTGCG TCACGGTCAA ATTGAGAAAG TTCTTAAATT ATTGAGTGTG GAAAACCCGG CTCCTGTAAT CAAAGACGGC AGCCGTTGGT TCAGAACTCC TGTTCGATAT CAAATGGATC ATGCCCGAAT CGCTCATTTA ACAGGCCAGC GTGTTCAGGA ATGGCAAGAA GTTCAGGCAT ACCTTGCAGA TACTGATTGT AAGATGACCT TCCTTCGCCG AGCGCTGGAC GATTTTGATC CAACGCCCTG CGGTAAGTGC GCATCTTGTG TTGGTCGGCT CGTTATCAAT ATTCCGGTAG ATCCTAGTTT GGCGCATCGT GCGGGGACCT TTCTTAAACA CGCCGAAATG GTAATTAGTC CAAAAGCACA GGTCGCAGCC AATGCGTTTT TAGAATACGG CTTTCGTGGT AACCTCCCAC TTAACCTTCG AGCACAAGAA GGGCGTGTTT TATCGCGCTG GGGCGATGCT GGTTGGGGGC ACATGGTAGC GGACAACAAG CATGCTGGAC GGTTCATTGA TGAATTAGTC GAAGCCATGG TTGAAATGGT TCAACAGCGC TGGCAGCCTA ATCCTGCACC TCAGTGGATA TGCTGCGTAC CTTCTCGGAA CCATCCAGAA CTGGTGCCAG ATTTTGCTCG CAGACTAGCA ATTCGTTTAG GCCTACCTTT TGTTGATGCT GTAAGTAAAG TAAAAGACAA TCAACAGCAA AAAGGGCAGC AAAATCGGTT CCATCAATGT CGTAATTTGG ATGGGGCATT TGCTGTTAAT CAAGATATCC CAACTACTCC AGTGTTACTT GTTGATGACA TAGTAGATTC TGGTTGGACG CTGACCGTTA TATCAGCATT ATTACAACAA GCAGGTAGCG GTGTAGTGTA TCCCGTGGCA CTTGCTTCCT CTTCGGTGAA AGACTCATGA
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Protein sequence | MNRDQAKLHL QTALANTDAD FRDGQWEAID ALVNHRQKLL VVQRTGWGKS SVYFISTKIF RDRGMGPTII VSPLLALMRN QIESAARLGI VAETMNSTNT ADWQAVTQRI LNNQIDCLLI SPERLANDNF IETVLQPIAD RIALMVIDEA HCISDWGHDF RPDYRRIVNI LRQLPANTPV LGTTATANNR VVADIQTQVG DIQIHRGPLT RESLALQTMV LPDQASRLAW LVQVIPTLPG TGIVYTLTVP DAEQVANWLT NNGIDAKAYH GSVEAEGFEN SNTYRQHLEE LLLNNRLKVL VATTALGMGY DKPDLSFVIH YQAPGSIVGY YQQVGRAGRG IDHAVGVLMS GVEDQDIHEF FRESAFPSEA QVNEILHVLE QSDGLSLRSI EEQTNLRHGQ IEKVLKLLSV ENPAPVIKDG SRWFRTPVRY QMDHARIAHL TGQRVQEWQE VQAYLADTDC KMTFLRRALD DFDPTPCGKC ASCVGRLVIN IPVDPSLAHR AGTFLKHAEM VISPKAQVAA NAFLEYGFRG NLPLNLRAQE GRVLSRWGDA GWGHMVADNK HAGRFIDELV EAMVEMVQQR WQPNPAPQWI CCVPSRNHPE LVPDFARRLA IRLGLPFVDA VSKVKDNQQQ KGQQNRFHQC RNLDGAFAVN QDIPTTPVLL VDDIVDSGWT LTVISALLQQ AGSGVVYPVA LASSSVKDS
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