| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4221 |
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| Symbol | |
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| ID | 4842829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 4947128 |
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| End bp | 4949329 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640121499 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001052555 |
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| Protein GI | 126176406 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGC TGCTGCAATT GAAGCAGCAA GGCTTGCCGA TGGCGGAGAT CAACGCCATC
GCGCAAGTCC CTGCCAGTGA GGACAAGTTA AGCCAAGCGA TGACACAACT GCTAATGCCG
CCACATCCGA TTGACAGCCA AAAATGGTGG GCGCTCACCA CCCAGCGTAT TGAACAACTG
CATCAACTCG CCAAAGACAT CACCCAGACC ATGGCGCAGC AGAGCGAGTA TCAACAAAAC
CAAGCCCTGA CCTTCCTCGG CCTGTACTTG TCATCAGCGC TGTTCACCGC AACCGTTACA
CTCTGGCTCG GACAGAAGAT CATTCGCAAC TTTATGGATA AAATCACTAA GATTGCCAAT
GACATGCAGC AAATGGCGGA AGATCCTAAG CTCAATATCA ATATCCGCGT TTCAGGTACT
GATGAACTTG CTCGCATGGC CCGTGCCATG AACCGGATGA TCAGCGAGCG GCAGAAGGCG
AACCATGCGC TCACCCGCGC CGCTGCGGTA TTTGACTATT CTGCCGAGGG CATAATGGTG
ACTGATGCCG ATAACCATAT CGAACTGGTC AATCCGGCTT TCTGCAATAT TACTGGCTAT
ACATTGGAAG AGGTGAAAGG CCGCAGCCCA TCCATCCTCA GTTCTAGCCG CCATTCGCAG
CACTTTTACA CCACCATGTG GGAGTCGCTG CAAACAGAAG GAAAATGGGA GGGCGAGGTT
TGGAATAAGC GCAAAAATGG CCAAGTGTAT CCCGAGTATT TAGCCATTAC TGTGGTGCGA
AATGAGCAAG GACAAATAAT CCAACACATT GGTTTATTTA TGGATATCAG TAAGCGTAAG
CAATATGAGC AAGATCTTTG GTATCAAGCC AACTTCGATG CGTTAACGGG ACTGCCTAAT
CGTAAGTTGT TTAATGAGCG CCTACAGCAC GAAATCCATG TGGCGCAGCA TGACTCACGC
AAACTGGCGA TTCTGCTGAT AGATTTAGAC CAATTCAAAT ACATCAACGA TGTGCAAGGC
CATGCCACGG GCGACTTATT ACTTAAAGAT GTGGCCAAAC GCTTAGAAGG CATTGCGGGT
AAAACCGACT TTATCGCCCG CATCGGGGGT GATGAATTTG TGCTTATATT GCCTCGACTG
ACTAACGAAC TCGCCATCGA ACACATGGCA ACGCGTATTA TCGAAACCTT AGGCATGCCG
TTTGACTTAA ATGACCGCGA GATCCAGATT TCAGCCAGCT TTGGTATCGG CGTCTATCCC
GAAGATGGCC TCGATGTCAG CTCACTCACC CGCAATACCG AAACCGCCAT GTATCAAGCC
AAAGATGCGG GACGGAACAA CTTCAAATAC TTTACCGCGG GCATGAATGA AGCCATGTTC
GCTCGGATGG AGTTAGAGCA ACGCCTGCGC CGCGCCGTGG CACAAAATGA ATTTGCCCTG
CATTATCAAC CCATAGTGGA TATGCAAACT GGAGTCGTCT GTAGCGTCGA AGCCCTTATC
CGCTGGCAAG ATCCTGACTT TGGCCTGATC CCACCGGATC AATTTATCCC GCTGGCCGAA
GAAACCGGAC TGATAGAACC TATGGGCGAA TGGGTGCTCA ACCAAGCCAT GCATGATTTG
AGACAGTGGC AGAAAAGTGG CTTAAAAATC AATGTTGCGA TTAATGTTTC TGGCCGCCAA
TGTATCAACA CCCGCGGCAT GGGATTCGAC CAAGTGCTGC AGGAATGCTT TAACCGCCAC
CATGTGAACC CGCGCAATGT GCATATTGAG ATCACAGAAA GCATGCTGAT GGGCGATGCC
AGCCACTGCT TGAGCACGCT CGAATCGATT CGCCATTTAG GCTCGCAAAT CTATATCGAT
GACTTTGGTA CGGGTTATTC TTCCCTGAGT TATTTGAAAA AATTCCCTAT CTCAGTGATT
AAAATTGATC GTAGCTTTGT GGAAAATGCC CTCGAAAGTA ACGCTAATGC TAACTTAGTC
AAAGCCATCG TCATGATGGG GCAAAGCCTC GAAATGGAGT TAGTGGCCGA AGGCATAGAA
ACCGAGGCCC AGTGGCACTT CCTGCGGGAT TTAGGTTGTC ACTTTGCCCA AGGATATTTG
ATCTCTAAAC CGCTGCCCTT CGACGAGATC ACCCCCTTGC TGCACATCAA GCACACAGCA
CTGCTCAACC ACGATTACCA AGATAGATGC GTGAATATCT AA
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| Protein sequence | MAKLLQLKQQ GLPMAEINAI AQVPASEDKL SQAMTQLLMP PHPIDSQKWW ALTTQRIEQL
HQLAKDITQT MAQQSEYQQN QALTFLGLYL SSALFTATVT LWLGQKIIRN FMDKITKIAN
DMQQMAEDPK LNINIRVSGT DELARMARAM NRMISERQKA NHALTRAAAV FDYSAEGIMV
TDADNHIELV NPAFCNITGY TLEEVKGRSP SILSSSRHSQ HFYTTMWESL QTEGKWEGEV
WNKRKNGQVY PEYLAITVVR NEQGQIIQHI GLFMDISKRK QYEQDLWYQA NFDALTGLPN
RKLFNERLQH EIHVAQHDSR KLAILLIDLD QFKYINDVQG HATGDLLLKD VAKRLEGIAG
KTDFIARIGG DEFVLILPRL TNELAIEHMA TRIIETLGMP FDLNDREIQI SASFGIGVYP
EDGLDVSSLT RNTETAMYQA KDAGRNNFKY FTAGMNEAMF ARMELEQRLR RAVAQNEFAL
HYQPIVDMQT GVVCSVEALI RWQDPDFGLI PPDQFIPLAE ETGLIEPMGE WVLNQAMHDL
RQWQKSGLKI NVAINVSGRQ CINTRGMGFD QVLQECFNRH HVNPRNVHIE ITESMLMGDA
SHCLSTLESI RHLGSQIYID DFGTGYSSLS YLKKFPISVI KIDRSFVENA LESNANANLV
KAIVMMGQSL EMELVAEGIE TEAQWHFLRD LGCHFAQGYL ISKPLPFDEI TPLLHIKHTA
LLNHDYQDRC VNI
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