Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4207 |
Symbol | |
ID | 4842540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4927656 |
End bp | 4928585 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640121485 |
Product | general secretion pathway protein C |
Protein accession | YP_001052541 |
Protein GI | 126176392 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3031] Type II secretory pathway, component PulC |
TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000718713 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTTAT TAGATAAAGT TATCGCAAAA GCCATTGGCA TGCCCCATAA ACCCCTAAGC CGGATTGTCT TCTGGTTGGG CTTTATTGTG ATCATGTTGT TAGCTGCGCA AATTACATGG AAATTAGTGC CTACTAGCTC ATCAGCCAGT GCTTGGTCCC CAACGCCCGT AAGCGTGAAT GGCAAAGGTG CCGGTCAGGT TGAGCTCGCA GGTCTGCAGC AGCTTGGACT CTTTGGTAAG GCGGATGCGA CATCTGATAA ACCTAAAGTC GAAGCAGTCG AGACTGTGAC CGATGCACCT AAGACCACAC TCTCTATTCA GCTGACTGGG GTTGTCGCAT CGACAGCGGA CCAGAAAGGC CTCGCAATTA TTGAGTCAAA CGGCAGCCAA GATACTTATA GCCTCGGCGA TAAGATCAAG GGCACATCTG CATCACTCAA AGAAGTCTAT GCCGACCGTA TTATCATCAC TAACGCTGGC CGTTACGAGA CCTTAATGCT CGATGGCTTA GTGTATACCA GCCAAAGCCC AGCCAATCAG CAGCTACAAC AAGCTAAGAG TAATAAGGCT GGCTCGGCAG TGAGCCGTGT TGATCAACGT AACAATGCCG ATATTTCCCA AGAACTCGCC GAATCCCGCA CCGAATTGTT AGCCGACCCC AGTAAGATCA CCGATTACAT TGCCATTTCA CCCGTGAGAC AGGGTGATTC AGTGGCAGGT TATCGTTTGA ATCCGGGTAA AGACGCCAAT TTGTTCAAGC AGGCGGGTTT TAAAGCCAAT GATTTAGCCA AATCGATTAA TGGATACGAC TTGACCGTAA TGAGTCAGGC GTTAGAAATG ATGAGCCAAT TATCCGAGTT AACCGAAGTA TCAATTATGG TTGAACGGGA AGGACAATTG GTTGAAATCA TGTTTAGTTT GCCGCAATAA
|
Protein sequence | MDLLDKVIAK AIGMPHKPLS RIVFWLGFIV IMLLAAQITW KLVPTSSSAS AWSPTPVSVN GKGAGQVELA GLQQLGLFGK ADATSDKPKV EAVETVTDAP KTTLSIQLTG VVASTADQKG LAIIESNGSQ DTYSLGDKIK GTSASLKEVY ADRIIITNAG RYETLMLDGL VYTSQSPANQ QLQQAKSNKA GSAVSRVDQR NNADISQELA ESRTELLADP SKITDYIAIS PVRQGDSVAG YRLNPGKDAN LFKQAGFKAN DLAKSINGYD LTVMSQALEM MSQLSELTEV SIMVEREGQL VEIMFSLPQ
|
| |