| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4206 |
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| Symbol | |
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| ID | 4842539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4925514 |
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| End bp | 4927631 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640121484 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_001052540 |
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| Protein GI | 126176391 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.016769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA AAAGGATTCG ACGCAAGCTG ATTGCAGGGA TTGTTGCGGG TGCAGCCATG
TTCTCCTCCC AATTCGCTTG GTCTGAACAG TATGCGGCCA ACTTTAAGGG CACGGATATT
CAAGAGTTTA TCAACATAGT TGGTAAAAAC TTGAACAAGA CCATCATAGT CGACCCGACG
ATCCGCGGTA AAATCAACGT TCGCAGTTAT GATCTGCTGA ACGATGAACA GTATTACCAG
TTTTTCCTCA ACGTCTTACA AGTCTACGGT TATGCCATCG TCGAGATGGA GAATAACGTC
ATCAAAGTCA TCAAAGACAA AGACGCCAAA ACTGCAGCAA TCCGAGTGGC TAATGATGCC
GAACCTGGGA TAGGCGATGA GATGGTCACG CGTATCGTGG CGCTGTATAA CACTGAGGCC
AAACAATTAG CTCCGCTGTT ACGCCAATTA AATGATAACG CGGGTGGCGG TAACGTAGTG
AACTACGATC CCTCCAACGT CTTGATGCTG TCTGGCCGTG CCGCTGTGGT GAACAAGTTA
GTTGAAATCG TTCGCCGCGT AGATAAACAG GGCGACACCT CAGTACAAGT GGTGCCGTTA
GAGTTCGCTT CCGCCGGTGA AATGGTACGA ATTATCGATA CCCTTTATCG CGCCACGGCT
AACCAATCTC AAATGCCAGG CCAAGCGCCG AAAGTGGTTG CTGACGAACG TATCAACGCT
GTGGTTGTTA GCGGCGACGA AAAGAGCCGC CAACGTGTGG TTGAGCTTAT TCATCGTCTT
GATGCCGAGC AAGCCAGCAC AGGCAACACT AAGGTGCGTT ACTTACGTTA TGCCAAAGCA
GAAGATTTAG TTGAAGTGCT GACAGGTTTT GCTCAAAAGC TAGAGGGCGA TAAAGATCCA
AGCGCTCAAG CTGCAGGTGG CAAACGCCGT AATGAAATCA ATATTATGGC CCATGCCGAG
ACCAACGCTT TAGTGATCAG TGCCGAACCC GATCAAATGC GGACTATCGA GAGCGTGATT
AATCAGCTCG ATATTCGCCG TGCTCAAGTG TTAGTCGAAG CGATCATTGT CGAAGTTGCT
GAAGGCGATA ACGTTGGCTT CGGCGTGCAA TGGGCGTCTA AAGCGGGTGG TGGGACTCAG
TTTAATAACT TAGGCCCAAC CATTGGTGAA GTCGGTGCGG GTGTTTGGGC GGCTCAGACT
GAGAAAGCTT CTCAAACCTG TACAGGTTCA GGTGATAATA AGACCTGTAC AGATAACCCA
GATAAGCGCG GTGATGTGAC ACTACTTGCC CAAGCTTTAG GCAAAGTAAA CGGTATGGCT
TGGGGCGTGG CCATGGGCGA CTTTGGTGCC TTAATTCAAG CCGTGTCGAG TGACACTAAC
TCAAACGTAC TGGCGACACC GTCAATTACC ACTTTAGATA ACCAAGAAGC GTCTTTCATC
GTCGGTGATG AAGTGCCTAT TCTGACGGGC TCTACCGCCA GTTCGAGCAA CAGTAACCCA
TTCCAAACCG TTGAACGTAA GGAGGTTGGG GTTAAGCTGA AAGTGGTGCC GCAGATCAAC
GAAGGTAATG CGGTTAAGCT GACGATTGAA CAGGAAGTGT CAGGGGTTAA CGGTAACACA
GGGGTGGATA TTTCCTTTGC TACTCGCCGT TTAACCACCA CTGTTATGGC TGACTCAGGT
CAAATCGTGG TTCTGGGTGG CTTGATCAAC GAAGAAGTAC AAGAAAGCAT ACAGAAAGTA
CCGTTCTTGG GTGATATCCC CATCATTGGC CACTTGTTTA AATCTTCTTC GAGCAAAAAG
ACCAAGAAAA ACCTGATGAT CTTCATCAAG CCAACCATTA TCCGTGATGG CATCACAATG
GAAGGAATTG CTGGTCGTAA ATATAACTAT TTCAGAGCAT TACAACTTGA GCAGCAAGAA
CGTGGCGTTA ACTTAATGCC AAATACTAAA GTGCCTGTGT TGGAAGAATG GAATCAATCA
GAGTATTTAC CGCCAGAAGT TAACGCGATT TTAGAGCGTT ATAAAGAAGG CAAAGGTTTA
GATACCCAGA TGCGCAAAAC GGATCCGACC TTAAAGTCAC TGGAAGAAAA CAAGAATAAA
GATAAAACCA ATGAGTGA
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| Protein sequence | MNNKRIRRKL IAGIVAGAAM FSSQFAWSEQ YAANFKGTDI QEFINIVGKN LNKTIIVDPT
IRGKINVRSY DLLNDEQYYQ FFLNVLQVYG YAIVEMENNV IKVIKDKDAK TAAIRVANDA
EPGIGDEMVT RIVALYNTEA KQLAPLLRQL NDNAGGGNVV NYDPSNVLML SGRAAVVNKL
VEIVRRVDKQ GDTSVQVVPL EFASAGEMVR IIDTLYRATA NQSQMPGQAP KVVADERINA
VVVSGDEKSR QRVVELIHRL DAEQASTGNT KVRYLRYAKA EDLVEVLTGF AQKLEGDKDP
SAQAAGGKRR NEINIMAHAE TNALVISAEP DQMRTIESVI NQLDIRRAQV LVEAIIVEVA
EGDNVGFGVQ WASKAGGGTQ FNNLGPTIGE VGAGVWAAQT EKASQTCTGS GDNKTCTDNP
DKRGDVTLLA QALGKVNGMA WGVAMGDFGA LIQAVSSDTN SNVLATPSIT TLDNQEASFI
VGDEVPILTG STASSSNSNP FQTVERKEVG VKLKVVPQIN EGNAVKLTIE QEVSGVNGNT
GVDISFATRR LTTTVMADSG QIVVLGGLIN EEVQESIQKV PFLGDIPIIG HLFKSSSSKK
TKKNLMIFIK PTIIRDGITM EGIAGRKYNY FRALQLEQQE RGVNLMPNTK VPVLEEWNQS
EYLPPEVNAI LERYKEGKGL DTQMRKTDPT LKSLEENKNK DKTNE
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