| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4181 |
|---|
| Symbol | |
|---|
| ID | 4842007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 4894797 |
|---|
| End bp | 4895903 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640121459 |
|---|
| Product | stearoyl-CoA 9-desaturase |
|---|
| Protein accession | YP_001052515 |
|---|
| Protein GI | 126176366 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00992802 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC CCCCTATCAT CTGGCTTAAT GTCAGTCTGT TTGCCATCAC TTTCCTCAGT
GCGGTGATCT TAGTTCCATG GCGCGGTATT GTTCACGGCT ACGGTGCCAG TGAATGGATC
GCTTTTATTG TCTTAGCCTT TGCCAGTGGT CTGTCGATCA CCGCAGGTTA TCACAGACTG
TGGTCACACA AGGCCTATAA AGCCCATCCA GCCGTGCGAT TTATGTATGC ACTCGGCGGT
GCTTTAGCAT TACAAAACAG TGCATTACAT TGGGCATCCG ATCACAGAAT TCACCACAAG
CACGTAGACG ACAACGACAA AGACCCGTAC TCAGCCAAAA TGGGATTCTG GTACAGCCAT
ATCGGTTGGA TGCTGCGTGA GTATCAGTCG CAACGCTATC ATGATTATCA AAATGTGCGC
GATCTGCAAA ATGACCGTAT CGTTATGTGG CAACACAAAC ATTACCTCGC ACTCGTATTA
CTGATGAACA TTGGACTGCC TGCCCTGCTC GGCTGGCTGA ACGGCGACGT ACTGTCTATG
TTATTGATGG CGGGTTTACT GCGTTTAGTG GTGGTGCATC ACTGCACTTT CTTCATCAAC
TCTTTAGCCC ACGTATGGGG CAGCCAGCCT TATACCGATA AGAACACTGC CCGCGATAAT
GGCTTTCTCG CCATGTTGAC CTACGGTGAG GGTTACCATA ATTTCCATCA CATCTTCGAA
AATGACTATC GTAATGGCAT TAAATGGTGG CACTACGATC CAACTAAATG GTTGATTAAG
TCATTATCTT GGTTGGGGTT AGCCAAGGAC TTGCGTACGA GTCCACAGGA ACGTATCGAG
AGCGCACGCT TGCAGATGCA GCTACTGCGG ACCAAGAACA AAGTCGTGCA CTTACCCAAT
GCCGATGAAA TTATTGAAAA AGTCCAAGCT GAGTATGAAT TACTCAAGCT GCACTTAATG
GATTACTATC AAGCAAAGAA AACCTTGCTT GAGGCCAAGC GTAAACAACT TGTCGATCAG
CAGCTATTGC AGCAAGTTGA AGAGCTAAAG GCGCGTTTTT TAGTCCAGCA AAAACATTGG
CGCAGCCTAA CCGCAACTTA TAGCTAA
|
|---|
| Protein sequence | MKTPPIIWLN VSLFAITFLS AVILVPWRGI VHGYGASEWI AFIVLAFASG LSITAGYHRL
WSHKAYKAHP AVRFMYALGG ALALQNSALH WASDHRIHHK HVDDNDKDPY SAKMGFWYSH
IGWMLREYQS QRYHDYQNVR DLQNDRIVMW QHKHYLALVL LMNIGLPALL GWLNGDVLSM
LLMAGLLRLV VVHHCTFFIN SLAHVWGSQP YTDKNTARDN GFLAMLTYGE GYHNFHHIFE
NDYRNGIKWW HYDPTKWLIK SLSWLGLAKD LRTSPQERIE SARLQMQLLR TKNKVVHLPN
ADEIIEKVQA EYELLKLHLM DYYQAKKTLL EAKRKQLVDQ QLLQQVEELK ARFLVQQKHW
RSLTATYS
|
|---|
| |