Gene Sbal_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_4178 
Symbol 
ID4842004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand+ 
Start bp4891380 
End bp4892477 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content45% 
IMG OID640121456 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_001052512 
Protein GI126176363 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0220139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAG CAGCAATGGA CCCTCAGACT TATGATACGC AGTTAGAACA CAAGCGTATC 
AAGCTAGAAC AAGCCTTTGC CCAATTTGAA ACACCGAGTG TTGAAGTTTT TGCCTCAGAG 
CCTGCCAACT ACCGTATGCG TGCCGAATTC CGCATGTGGC ATGACGGTGA CGACTTATAC 
TATTACATGT TCGATAAAGT ATTGAATGAG AAAGTGCGAT GCGATCAATA CTTGCCAGCC 
AGCGTGCTCA TCAATCAAAT GATGTCGGCC TTAATCGCCG AACTAAAACC GAATCCTAGT 
CTAAGACATA AACTGTTCCA AGTGGATTTT TTGTCGACCT TAAGCGGCGA GATCTTAGTG 
TCCTTGCTTT ATCACAGACA GCTTGATGAC CAATGGCGCG CCGATGCGAC TGCACTAAAA 
GCCAAGTTAA GCAGCCAGTT TAACGTCAAC ATCATCGGCC GTGCCCGTAA GCAAAAAATC 
GATTTAGATA AAGACTTTGT GGTCGAGTCA TTACAAGTGA ATGATAAAAC CTTCTTATAT 
AAGCAAATCG AGAACAGCTT TACTCAACCA AATGCCAAAG TTTCCGTAAA AATGTTGGAG 
TGGGCTATCG ATGCGACTCA GAACAGTCAG GGTGATTTAC TAGAACTCTA CTGTGGTAAT 
GGCAATTTCT CTATCGCACT GGCGCAAAAC TTTAATCGCG TATTGGCCAC CGAACTCGCT 
AAGCCTTCAG TCGATGCGGC GCAATACAAT ATCGAAGTGA ATGGTATTGA GAACCTGCAG 
ATTATTCGCA TGTCGGCCGA AGACTTTAGC GATGCCATGG CGAAGAAACG CAGCTTTAGA 
CGTTTAGAAG GTATCGATCT CGACAGCTAT GTGTGCAACA CCATTTTTGT CGACCCACCA 
CGCGCAGGGA TTGATCCTGA TACGTTGGCG TTAGTACAAG GTTACGAGCG GATCTTATAT 
ATTTCCTGCA ACCCTGAAAC CTTAAAAGAC AATCTGCAGC AACTGAACGA AACCCATAAA 
GTCACTCGCT TCGCCTTGTT TGATCAGTTC CCTTATACCG ATCACATGGA AACAGGTGTA 
CTACTGGAGC GTCGTTAG
 
Protein sequence
MNLAAMDPQT YDTQLEHKRI KLEQAFAQFE TPSVEVFASE PANYRMRAEF RMWHDGDDLY 
YYMFDKVLNE KVRCDQYLPA SVLINQMMSA LIAELKPNPS LRHKLFQVDF LSTLSGEILV 
SLLYHRQLDD QWRADATALK AKLSSQFNVN IIGRARKQKI DLDKDFVVES LQVNDKTFLY 
KQIENSFTQP NAKVSVKMLE WAIDATQNSQ GDLLELYCGN GNFSIALAQN FNRVLATELA 
KPSVDAAQYN IEVNGIENLQ IIRMSAEDFS DAMAKKRSFR RLEGIDLDSY VCNTIFVDPP 
RAGIDPDTLA LVQGYERILY ISCNPETLKD NLQQLNETHK VTRFALFDQF PYTDHMETGV 
LLERR