Gene Sbal_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_4174 
Symbol 
ID4842000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4881511 
End bp4882470 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content47% 
IMG OID640121447 
Productbiotin--protein ligase 
Protein accessionYP_001052508 
Protein GI126176359 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000228488 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA ATTGGGGAAG AAAGCGCCAG ATATTAGCGT TATTGTCTAG CGGTCAATTT 
GTTTCAGGCG AGCAGTTAGC CACTGAACTT GGGATTTCGC GCGCCGCTGT AAATAAGCAC
ATTGATGCGT TAGAAACCTA TGGCGTAGCA ATTTATAGCG TTAAAGGTCG CGGCTATAAG
CTAGCCAATC CCATCTCTTT GATTGATGCT TCACGTTTAG TGCAGTCAAT TGATAACCGT
TGTTTTTATT TTGATGAGAT CGCAAGCACC AACGGCTTTA TGCTTAGCCA TACCACTGAG
CTAAAAAATG GCGATGTGTG CGTGGCAGAG TATCAATCTG CAGGTCGCGG TCGCCGAGGT
CGCACTTGGG TGTCGCCCTA TGGGCATCAC TTGTACTTCT CATTGTTTTG GACATTCCCG
CAGGGAATGG CACAGGCTAT GGGTTTAAGT TTAGTAGTGG CGTGCACTTT GGTTGAAGTG
CTTAAATCGT TTGGGGTCGA GAATATTGGG GTTAAGTGGC CGAATGATAT CTATTTGGAT
AACAAGAAGC TTGCTGGGAT CTTGATTGAA ATGTCGGGAC AGGCGGATAG TCAGTGTCAG
CTGATCATTG GTGTTGGCGT TAATATGGCG ATGTCAGAGG AGCAAGGCAA AGGTATCGAT
CAGCCTTGGA GTGACCTGTC AGATTTGGTC GATATGCCAG ATAAGACTGC GCTTGTTATC
GAATTACAGA AGCAACTGAA GCGCGATATC CAGCTATTTG AACGTGAAGG ATTAGCTGCA
TTCAAGGCTC GTTGGCAAGC GGCAGACTTA TTTTATGGTC GTGAAATACG TTTGCTTATG
GGGGAAAAGT CTGTCGAAGG GATTTGTCGC GGTGTTGATG AGCAGGGTGC GGTATTGCTC
GAAACCGCCG ACGGTGTGCA AGCATTTATC GGCGGTGAAA TTAGCTTAAG GGCCCGCTAA
 
Protein sequence
MSDNWGRKRQ ILALLSSGQF VSGEQLATEL GISRAAVNKH IDALETYGVA IYSVKGRGYK 
LANPISLIDA SRLVQSIDNR CFYFDEIAST NGFMLSHTTE LKNGDVCVAE YQSAGRGRRG
RTWVSPYGHH LYFSLFWTFP QGMAQAMGLS LVVACTLVEV LKSFGVENIG VKWPNDIYLD
NKKLAGILIE MSGQADSQCQ LIIGVGVNMA MSEEQGKGID QPWSDLSDLV DMPDKTALVI
ELQKQLKRDI QLFEREGLAA FKARWQAADL FYGREIRLLM GEKSVEGICR GVDEQGAVLL
ETADGVQAFI GGEISLRAR