| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4074 |
|---|
| Symbol | |
|---|
| ID | 4845502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 4780257 |
|---|
| End bp | 4781324 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640121340 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001052409 |
|---|
| Protein GI | 126176260 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG GCTTTAATAC CTTGTTAAAA ACACCATTGA TCGCATTGTT ATGTTTATTT
ACCTTGGCTC AAGTGGCCCA TGGCGCAGAC GACGATTATT CGGCCGAGGG TGAACGAAGA
GCTAAAGCAG CTGGGGAGTC CTTGGTTGGC ACACCAGCCC CTCAGATGAA GATGACAACC
ATTGATGGTA AGGCGATTGA TCTTGCTGAT TTGTATGGTA AGAAGCCGGT TTATATTAAG
TTCTGGGCAA CCTGGTGTGT CCCGTGCCGT GAACAAATGC CGAGCTTTGA AGATATCTAC
AAAAAGTACG GTGACAAGGT TGAAGTCATT GCGGTGAACA CAGGTATCAG CGATAACATA
AAATCTGTCA CCGAGTTTAG TCAAAAAATG GGCTTGACCA TGCCCATTAC TATTGATGAT
GGCAAGCTAG CACGTGCGTT CCACTTACGT GTTACCCCTC AACATTTATT GATTGATAAA
AATGGTAAAT TTGCTTATTT CGGTCATAAG GATGATAAAG AGTTCCATCA GGCTTTGGAT
AGAGTAGTCG CTGAAAAAGC GACAGGTAAA CCTTTACATA ATCCGACCTT TGTAGCGAAA
GATTCAGGTT ATAACTTGGG CGATACAGTG CCTGATCTTG CTTTTTCTAC CATTGACGAA
AAGCCGCTTA ATATTCAATT TAATACCGCC AGCAGTAAAA AAGTGGTCGC GGTATTCTTT
GGCCCTTGGT GTGAGTGGTA TTTGGAAACA ACAGAGCCTA AGACGTCGCA GGCTTGTACT
CGGGTGCGTG AGCTGTTGGA GAAAAAATCG CAAGCATCCA CAGTGCAATG GGTAACGGTT
TCGACCAACT TATGGTCATC AGTTGCTGAG CTTAAGGATT ATCGTAAGAG TTATGGCACG
ACTATGCCAA TCGTGTTTGA TCGCGATGGT GAGTTGTTCA AGCAATTTGG TGTTAACCAA
GTACCAAGCA TTAGTTTAAT CGACGCTGAC GGTAAGGTTA TCCTAAAATC CTCGATTCAA
GATGATGATT TTGATGCCGT TTTACACACG ATTTCAGCAT TAAAATAA
|
|---|
| Protein sequence | MTTGFNTLLK TPLIALLCLF TLAQVAHGAD DDYSAEGERR AKAAGESLVG TPAPQMKMTT
IDGKAIDLAD LYGKKPVYIK FWATWCVPCR EQMPSFEDIY KKYGDKVEVI AVNTGISDNI
KSVTEFSQKM GLTMPITIDD GKLARAFHLR VTPQHLLIDK NGKFAYFGHK DDKEFHQALD
RVVAEKATGK PLHNPTFVAK DSGYNLGDTV PDLAFSTIDE KPLNIQFNTA SSKKVVAVFF
GPWCEWYLET TEPKTSQACT RVRELLEKKS QASTVQWVTV STNLWSSVAE LKDYRKSYGT
TMPIVFDRDG ELFKQFGVNQ VPSISLIDAD GKVILKSSIQ DDDFDAVLHT ISALK
|
|---|
| |