Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4052 |
Symbol | |
ID | 4844519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4757997 |
End bp | 4762523 |
Gene Length | 4527 bp |
Protein Length | 1508 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640121318 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_001052387 |
Protein GI | 126176238 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTAGGGG AAAATTTGAG TCAACTAATC CACAAGCTAG TGCTAGGCGC GCTTTGTATC CTAAGTTTGT GGGGGATCTC GTGCAATGGA TTAGCGCAAC CATTGAGCGC GGCTTTCACA CAGCTTAAAT TTGAACATAT TCGCAGTGAA GATGGTCTCA ACCAGAATAC GATTACCAGC CTGTTTATGG ACAGTGCTGG CATGTTGTGG ATTGGTACTC AAGATGGTTT GCATGCCTAC AACGGTCATA ACTTCACCAT TTTTACCCAC TCCCCCAACG ATCCTAGCAG TATTTCAGAA AGTTATGTCT CTGACATTAT TCAAGATTCA GAAGGCTACA TTTGGGTTTC CACATTCAGC CAAGGGGTCA ATCGACTCGA TTTGAGTACA GGGACCTTTG AGCACTTTGG CCAAGAACAA GGTCTGACCG ATCCCCGCAC CACCAAACTC AGCATAGTGG GTAATACACT CTGGATTGGT ACTAAAGCAG GACTATTTTC CCTATCGACC AAAACCAAAC GCATTACCCA GGTCAGTTTA GGTAACAGCG TCGAGCCCTA TATCACTAGC TTAGCCAATG TTGAAAACAC TTACCTGCTG GCAGGTACCC AAGATAGCGG CACCTTTGCC GTCAGTGCGA ATACCATCAC TCGCTTAAAC GTGCCGCAAA ATGTCACCAC CTATCAAATT CGGGCGAACT CGGCCTACTC GATCACTTTA GCCCTTGGTG GACAACTATG GCACTACAAC TTGGCCTCGC AGCAGGGCGA AATCCTTTGG CAGACTGACG ATAACGTGCC TTACATTAAG GATTTTATCC AAACCGAACA GGGTGACTTT TGGGTCGTCG GGCCTGAAGC GGGTCTCATT CAACTCGAGA AAAATGATAA TTTATTCACA GCGACCTACC ATAGATACGA TCCTAAGCGC ACTAACAGTA TCAGTGAAAA TAACATACTG AGTTTACTAC AAGATCCCTT TGGCAACTTA TGGCTAGGCG CCAGTTATTC GGGATTAGAT AAAATTAATA CCCGTCGCCA GTATTTTCAG CATATTTTCG AATACACCAC GGAGCTGTCG CAACAGAGCA ACAATATTCG CACCTTATTC CGCAGCAAAG ATAATGTCCT TTGGATAGGC ACTGAAGGCG CAGGGCTTAA GCGCATATTA GCCGATGGAA AATATGAGCA TTATACGGAG CTATTTGCGA ACGCCTTAGG AATGCATCAA CGCAATTTAA ACCTCATCCT GCGAGATATT GATCAAGACA AAGCTGGCGT GCTCTGGTTT GCCACTAACT ATGGACTCGG TCGGCTGTCG CCAGAGGGCG ATTTCCAATT ACTCAAGGTC ACTACAAGTA CGGACCAAGG CTCTGAAGCC AATTATATTC GCAATCTAGA CATTGATGAT CAAGGTCATC TCTGGGTAGC AACGACCCAT GCCATCTATC GCAAAGCTAT AGATACCGAT GAGTTTACTT TTATCTCATT GGCAAATATT GATCATTTCT ATCCGGCACA AAACCAGCTT TTAATCCTAA GAGCACACAA AGATACGCTT TGGATAGGCA CACTCAATGG CCTGCTGAAA CTGGATATGA AAACGGGGAT AGGTAAATCT TACTTCCATC AATCCTCTAA TAAGAAAAGC TTAATCAACA ACCGTGTCCG CGATATTTTG GTGACTCAGG CGGGTGAGGT ATGGTTCGCC ACCCATGGCG GGATCAGTAA GTTATCTTCC CAAGGTGCCG ATGCAGGCTT TACTCATTAC ACCCGCGAGC AGGGATTACC AAGCGATACC ATCTACGCCT TACTTGAGGA CCAAGAACAT AACATTTGGT TTAGCAGCAA TGCCGGCATA GGTAAACTTA ACCCTAAAAC CAATCGCATC ATCATATTCA ACGAACAAGA AGGTTTGCAG GCACTGGAGT TTAACGGCGG TGTAAAACTT CAGGACAGCG ATGGCGATCT CTGGTTTGGC GGTATTAACG GCATCAATCG TTTCAATCCC CAGTCGATTC CAGATCAACG ACCCGATGTT AAAGTCGCGC TCACTGGCTA TAGCATTGCG GGAAAAGGCC ACACGATTCT CGATTTAAGC CGCCCCCCTA GCATAGTGAT GAACTATAGC GATCAGCTAA TCAGTTTTGA GGTGACCTCA TTGGATTTCA GCTACACGGG TAAAAACCGT TTCAGCTATT ATCTCGAAGG GTTTGATAAC GAATGGCATG AGCTACCCAC AGGCAATGAA ATCACCTTCA CTAACATCAA TTCTGGCCAT TACCGATTAC ATGTTCGTCA TGGGCTGCAA TACAACTCAG AAGGTGCCTA CGCGCTGCTT GTCGATCTGA ATGTACAAGC CCCCTTGTAT CGCACTCAAT TCGCCTACGT CCTTTATTTC TTACTCACTT TAGGACTGCT GGCTTGGGTC ATTCTCTGGC GTAAAAAGAA ACATCAAATA CAACGAGAAT TTGAAACCAG CATTCGCGCC TCAGAGGAGC GGCTAAAACT GGCACTTTGG GCGTCTGGCG ATGGCATGTG GGACTGGAAC ATACCCGAAA ACCAAGTCTA TCGTACCAAT ATGGACTCTT CGATTCCCCA TTGGAACAGC AGCAATATTG TCCATGAGAG CATGCACTCT GAAGACAGAG AGAGATTCAA ACTTGAGCTA AACGAGCACC TTCAAGGCCG CTCGCCTTTC TTCGAAGCAG AGTACCGTGT CGAACGCTCA CCGGGTAATT GGGTGTGGAT TTTAGACCGT GGCAAAGTGG TTGAAAAAGA TAGCCTAGAT AACCCAATCC GCATGACAGG GACTAACCGT AATATTACCT CTCGTAAGCT GATTGAGAAC GAGCTGGTAT TGTCCTCGCA AGTGCTCAAC AGCATGAATG AAGCGGTTGT CGTTGCGGGC CTAGATTATC GCATTCGCTC GGTTAACCCT GCCTTTTGTG CCATTACTGG CTACACAGAG CGCCAAATCA CCGACAGGCA TTTCATTCAT TTAGCCTTTG GGCGCCAACA GCGTGAATTG TTCAATACCA TTGAACAACA GCTACTGCGC CATAAACATT GGGTCGGGGA GCTGTGGATC CGCAATAAAC AACGGCAGGC GATTTTAGTC TGGCTTGAGA TCAACCAAGT TATCGATATT AAAGGTGAAA CCAGTCACTT CGTCGCAGTA TTTACCGACA TCACACAGCG GAAAAAAGCC GAAGAAGATC TGCGTTTCCT CGCCAGTTTC GACACCTTAA CGGGCCTGCC AAACCGAACC TTATTCCAAG ACAGGCTCAA TCACGCGATA ACCCAAGCGC ATAGGGCGAA CAATATCGTC GCCTTACTGT TTTTAGATCT CGACCGCTTT AAACATATCA ACGACTCCAT GGGTCACCAT GTCGGCGATT TACTGCTCAA AGCAGTCGCC AGAAGACTGC AAAATGCAGT GCGTGATGGC GATACGGTCG CACGCCTAGG CGGTGATGAA TTTACCATTA TTTTAGAAGG GGTAGCGAAA ACCAAAGCCG CCACTTTGAT CTCAGAAAAA GTGCTCAGAG CATTCCAAAC GCCCTTCTTA TTGGACGATA AAACGCTAAC CATTTCGACC TCCATCGGCA TCAGTCTCTA TCCAAACGAT GCTGATAATG CCGACTCGCT GATTAAATTT GCCGATACAG CCATGTACCA CGCGAAATCG TCAGGTAGAA ATAACTTCCA GTTTTATACT TCGAAATTAA ATGAAATTGC CACTCGCCAT GTGCAACTCG AAAGTGGGTT AAAAGAGGCA ATTCAGCGCA ACGAATTGAG CTTAGTTTAT CAACCTAAGT TCTGTTTAAA GGATGGTTCA CTCACTGGGA TAGAAGCGCT TTTACGTTGG CATCACACTG AACTTGGCCC CATTTCCCCC GTCGAGTTTA TTCCGCTGGC GGAAGAAACC GGCATCATCA CTCAAATTGG TCATTGGGTG ATCAATCAAG CCTGCCAGCA ATTAGCCGAA TGGAATAGCT TAGGATTCAA CGGTATCACT GTCGCCGTTA ACCTATCGGC TCGCCAACTT AAGGCCGATA TTATCTCCAC TATAGAAGTT GCCTTGGCAG TATCAGGTCT CCCGGCACAA TCCCTTGAGC TTGAACTGAC AGAGTCGATG ATCATGGGCA ATCCGCAGGA GTCGGTCAGC ATTCTATCTA AACTCAAAGC CCTAGGCTTG ACCATAGCGG TGGATGATTT TGGGACGGGT TATTCGAGCC TAAGTTATCT CAAACGCTTC CCGATAGACA CGCTGAAAAT CGATCGAGAG TTCGTCAGAG ACATCACCAA TGATCCCGAC GATGCGGCCA TCACCAGCGC CATTATCGCC CTCGCCCACA GTTTAGACCT CAACGTTGTC GCCGAAGGTG TAGAGACCCA AGAACAACTC AACTTCTTGG CGATGCAGGG TTGCGATCAA GTACAAGGTT TCTTACTCAG TAAACCCTTA AGTGCCGCAG ACTTTTTAAC TTTACTCAAG AATCAATCTA AGCCACAGCC GATTTGA
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Protein sequence | MVGENLSQLI HKLVLGALCI LSLWGISCNG LAQPLSAAFT QLKFEHIRSE DGLNQNTITS LFMDSAGMLW IGTQDGLHAY NGHNFTIFTH SPNDPSSISE SYVSDIIQDS EGYIWVSTFS QGVNRLDLST GTFEHFGQEQ GLTDPRTTKL SIVGNTLWIG TKAGLFSLST KTKRITQVSL GNSVEPYITS LANVENTYLL AGTQDSGTFA VSANTITRLN VPQNVTTYQI RANSAYSITL ALGGQLWHYN LASQQGEILW QTDDNVPYIK DFIQTEQGDF WVVGPEAGLI QLEKNDNLFT ATYHRYDPKR TNSISENNIL SLLQDPFGNL WLGASYSGLD KINTRRQYFQ HIFEYTTELS QQSNNIRTLF RSKDNVLWIG TEGAGLKRIL ADGKYEHYTE LFANALGMHQ RNLNLILRDI DQDKAGVLWF ATNYGLGRLS PEGDFQLLKV TTSTDQGSEA NYIRNLDIDD QGHLWVATTH AIYRKAIDTD EFTFISLANI DHFYPAQNQL LILRAHKDTL WIGTLNGLLK LDMKTGIGKS YFHQSSNKKS LINNRVRDIL VTQAGEVWFA THGGISKLSS QGADAGFTHY TREQGLPSDT IYALLEDQEH NIWFSSNAGI GKLNPKTNRI IIFNEQEGLQ ALEFNGGVKL QDSDGDLWFG GINGINRFNP QSIPDQRPDV KVALTGYSIA GKGHTILDLS RPPSIVMNYS DQLISFEVTS LDFSYTGKNR FSYYLEGFDN EWHELPTGNE ITFTNINSGH YRLHVRHGLQ YNSEGAYALL VDLNVQAPLY RTQFAYVLYF LLTLGLLAWV ILWRKKKHQI QREFETSIRA SEERLKLALW ASGDGMWDWN IPENQVYRTN MDSSIPHWNS SNIVHESMHS EDRERFKLEL NEHLQGRSPF FEAEYRVERS PGNWVWILDR GKVVEKDSLD NPIRMTGTNR NITSRKLIEN ELVLSSQVLN SMNEAVVVAG LDYRIRSVNP AFCAITGYTE RQITDRHFIH LAFGRQQREL FNTIEQQLLR HKHWVGELWI RNKQRQAILV WLEINQVIDI KGETSHFVAV FTDITQRKKA EEDLRFLASF DTLTGLPNRT LFQDRLNHAI TQAHRANNIV ALLFLDLDRF KHINDSMGHH VGDLLLKAVA RRLQNAVRDG DTVARLGGDE FTIILEGVAK TKAATLISEK VLRAFQTPFL LDDKTLTIST SIGISLYPND ADNADSLIKF ADTAMYHAKS SGRNNFQFYT SKLNEIATRH VQLESGLKEA IQRNELSLVY QPKFCLKDGS LTGIEALLRW HHTELGPISP VEFIPLAEET GIITQIGHWV INQACQQLAE WNSLGFNGIT VAVNLSARQL KADIISTIEV ALAVSGLPAQ SLELELTESM IMGNPQESVS ILSKLKALGL TIAVDDFGTG YSSLSYLKRF PIDTLKIDRE FVRDITNDPD DAAITSAIIA LAHSLDLNVV AEGVETQEQL NFLAMQGCDQ VQGFLLSKPL SAADFLTLLK NQSKPQPI
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