Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4028 |
Symbol | |
ID | 4845564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4727259 |
End bp | 4728854 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640121294 |
Product | threonine dehydratase |
Protein accession | YP_001052363 |
Protein GI | 126176214 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.640825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCCAC TTGCATCGCA AGCTCGGACG GATTTAGCAC ATTTTCAGTT GGCACAAAGC TATCTGCAAA AAATCCTGTT GTCATCTGTG TATGACATAG CGAAAGTGAC GCCGCTTTCA AGCATGAACA AGTTATCGGC GCGTTTAGGT TGTCAGGTAT TTTTGAAGCG CGAAGATATG CAGCCAGTGC ATTCCTTCAA GTTACGCGGT GCCTATAACC GTATCGCCCA GCTGACGAAA GAAGAATGTC AGCGCGGCGT GGTGTGCGCT TCGGCAGGCA ATCATGCTCA GGGTGTGGCG ATGTCGGCGG CGAGTCGCGG CGTGGATGCT GTAATTGTGA TGCCTGAGAC GACGCCCGAT ATTAAAGTCG ATGCGGTGCG CCGTTTAGGT GGCAACGTGG TATTGCACGG CCAAGCCTTC GATCAAGCCA ATGGCTATGC GATGGCGATG GCTAAAGAAG AGGGCCGAGT CTATATCGCG CCCTTTGATG ATGAAGCAGT GATCGCAGGC CAAGGCACTA TCGCCCAAGA GATGTTGCAG CAGCAGCGCG ATCTCGAAGT GGTATTTGTG CCCGTGGGCG GCGGCGGTTT AATCGCGGGT ATCGCAGCCT ATTACAAGGC GGTGATGCCG CAGGTGAAAA TTGTCGGCGT CGAGCCAGAA GACGCTGCCT GTTTAAAGGC GGCGATGGAA GCGGGCGAAC CTGTGACACT GGCGCAAGTC GGTTTATTTG CCGACGGTGT GGCGGTAAAG CGTATCGGTA CTGAGCCGTT TCGAGTCGCC AAACTGTATG TCGATGAAGT AGTCACCGTC ACCTCGGATG AAATCTGCGC TGCGGTGAAA GATATCTTCG AAGATACCCG TGCGATTGCT GAACCCGCTG GGGCTTTGTC CTTAGCAGGG CTTAAAAAAT ATGTCAGCGC TAATGACAGT GGCGACAGCG GTAAAGGCGA GAAAGTCGCC GCGATTTTGA GTGGCGCGAA TGTGAATTTC CACAGCCTGT GTTATGTGTC TGAACGCTGC GAACTCGGTG AGCAAAAAGA AGCAGTACTG GCAGTGAAAG TCCCTGAACG TCCGGGAAGT TTCTTAAAAT TCTGTGAGTT ACTCGATAAG CGGGTGATGA CAGAGTTCAA CTATCGTTTC AGCAGTCGCG ATCTGGCCGT GGTGTTTGCT GGCATTCGTT TAAGCCGAGG CCAAGGCGAG CTTGAACAAA TCATCGCTAC CTTAGAGGCT AACGATTTTG AAGTGCAGGA TTTATCTGGC GATGAAACCG CGAAATTGCA TGTGCGCTAC ATGGTCGGCG GTCATCCACC TGAGCCTTTA GAAGAGCGTT TGTTTAGCTT CGAATTCCCC GAACATCCTG GTGCGCTGCT GAAGTTTTTA ACTACCTTGC AGAGCAAATG GAACATCAGT CTGTTCCATT ATCGCAACCA CGGCGCGGCT TTTGGCCGAG TGCTGGCGGG ATTTGAAGTA CCCGCGAGTG ATGCTTTGCC GTTCCAACAG TTTTTAACTG AGTTGGGTTT TGTCTATCAA GAGGAAACCC AAAGTCCTGC CTATCAGCTG TTTTTAAATG CGGGTAACGG CAGCAAAGTC TTATAG
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Protein sequence | MLPLASQART DLAHFQLAQS YLQKILLSSV YDIAKVTPLS SMNKLSARLG CQVFLKREDM QPVHSFKLRG AYNRIAQLTK EECQRGVVCA SAGNHAQGVA MSAASRGVDA VIVMPETTPD IKVDAVRRLG GNVVLHGQAF DQANGYAMAM AKEEGRVYIA PFDDEAVIAG QGTIAQEMLQ QQRDLEVVFV PVGGGGLIAG IAAYYKAVMP QVKIVGVEPE DAACLKAAME AGEPVTLAQV GLFADGVAVK RIGTEPFRVA KLYVDEVVTV TSDEICAAVK DIFEDTRAIA EPAGALSLAG LKKYVSANDS GDSGKGEKVA AILSGANVNF HSLCYVSERC ELGEQKEAVL AVKVPERPGS FLKFCELLDK RVMTEFNYRF SSRDLAVVFA GIRLSRGQGE LEQIIATLEA NDFEVQDLSG DETAKLHVRY MVGGHPPEPL EERLFSFEFP EHPGALLKFL TTLQSKWNIS LFHYRNHGAA FGRVLAGFEV PASDALPFQQ FLTELGFVYQ EETQSPAYQL FLNAGNGSKV L
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