Gene Sbal_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_4001 
Symbol 
ID4845066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand+ 
Start bp4689386 
End bp4690084 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content51% 
IMG OID640121264 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001052337 
Protein GI126176188 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.655634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATG CCTTGAATGA ACGAGGTATT GCCCACTGGG TCACACCTCT GCTGTGTGTC 
GAAGCAACGC CCGCTATCGC AACGAATACC CCGCATCCTT TGGCACACGC CGATATGATT 
ATCTGCATCA GCGCCAATGC TGTGACTTTT GCGGATAACA CCTTAACTAC TACAAATCCA 
CCCCATAAAG CTTGGCCTCC AGCTCAGTAC TTCGCGGTAG GGCATGCGAC TTGGGACGCA 
TTAAACCAAC TCGGTATTTC TGCCCTAGAA GCCCCTGATG ACTGTCAGCA GACCGAAGGG 
CTACTCACGC TCGTGCCGCT GCAAGAGATT AAAGGTCAGC AGATTACTAT TATACGTGGC 
GTCGGTGGCC GCGAAGCCTT AGCCGAACAA CTGGCTGCGC GCGGTGCACA TTTGCGCTAT 
TGGGAAGTGT ATCAACGAGC TTGTCCGCCA CTCGATGGTC AACAGTTAGC TCTGCAATGG 
CAAGCCTTCG GGATAGACAC GATTGTGGTG ACCAGCGGTG AAGTACTGGA TAACCTGATT 
AATTTAGTGC CAAAAGAGTT ATTTGCATGG CTGCGCTCAT GTCATATCAT AGTCCCAAGT 
AACCGAGTAG AAGCTCAAGC TCACGCCTTT GGTATAACCC AAGTCACCAA TGCCAATGCC 
GCCAACAGCA AAGCCGTGCT AAACGCCCTT AAACTCTAA
 
Protein sequence
MVDALNERGI AHWVTPLLCV EATPAIATNT PHPLAHADMI ICISANAVTF ADNTLTTTNP 
PHKAWPPAQY FAVGHATWDA LNQLGISALE APDDCQQTEG LLTLVPLQEI KGQQITIIRG 
VGGREALAEQ LAARGAHLRY WEVYQRACPP LDGQQLALQW QAFGIDTIVV TSGEVLDNLI 
NLVPKELFAW LRSCHIIVPS NRVEAQAHAF GITQVTNANA ANSKAVLNAL KL