Gene Sbal_3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3990 
Symbol 
ID4845036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4679328 
End bp4679831 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content49% 
IMG OID640121254 
Productputative transcriptional regulator 
Protein accessionYP_001052327 
Protein GI126176178 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTTC AATCATTTGC ACTCGATGAT ATTGCCGATT TGCACGAATC GGCCCAAGTA 
GAGTTTAAAC TCGCAGGTGG CCGCGACGGC CAAGGCCAAT TACCCGAAGA TATTTGGGCG
ACTTATAGCT CCTTTGCCAA CACTTTAGGT GGCGAGATCA TCCTAGGGGT GCGCGAAGAA
CGTGGCCATT TCAGCATTCA AGGCATCCCC AATCCGCTTC CTGTTTTACA AGAGTTTTGG
GAGATACTCG ATAATCCTAG CCGTACTAGC CATAATATTT TGGCGATTTC AGATGTGCAG
ATCATTGAAA TTATGAATAA AAAGCTGATT CGTATCCGCG TACCGCTGGC GCCTGAGCAG
CTCAAACCTA TCTATGTCGG CGGCGATCCT TACACAGGGA GTTATTTTAG GGTGGGAGAT
GCCGACATGC ATGCAAGCCG TCGGCAAGTC AACCTACTGT TACGCCGCGC CCATCTTTGC
ATGAAGCAAC TCAAGGCACG TTAA
 
Protein sequence
MTFQSFALDD IADLHESAQV EFKLAGGRDG QGQLPEDIWA TYSSFANTLG GEIILGVREE 
RGHFSIQGIP NPLPVLQEFW EILDNPSRTS HNILAISDVQ IIEIMNKKLI RIRVPLAPEQ
LKPIYVGGDP YTGSYFRVGD ADMHASRRQV NLLLRRAHLC MKQLKAR