Gene Sbal_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3980 
Symbol 
ID4845026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4669113 
End bp4669451 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content43% 
IMG OID640121244 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001052317 
Protein GI126176168 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATG GAGCGATTGG TAGCTCAAAT ATGTTGATGG AAACCTTAAA TATTCATCGT 
GAAGTGGCTA AAGGTGCGAT CAACATCACT TCAAATCCAG CCGACAATGG TATGGCTTAT
GGTTCATTCA CTGAGCTAAT TAAGAGTAAA GTTTCTGCCG TTAACCAAGA CCAGAATCAA
TCCTCTATGG CGATGGCTGC TGTCGATAGT GGTAAGAGTG ATGACCTCGT CGGTGCCATG
GTTGCTTCGC AAAAGGCCAG TTTGTCCTTT GCGACTATGC TCCAAATTCG TAATCGTCTT
GTGCAAGCAT TTGACGATGT AATGAAGATG CCTATTTAA
 
Protein sequence
MSNGAIGSSN MLMETLNIHR EVAKGAINIT SNPADNGMAY GSFTELIKSK VSAVNQDQNQ 
SSMAMAAVDS GKSDDLVGAM VASQKASLSF ATMLQIRNRL VQAFDDVMKM PI