| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3979 |
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| Symbol | fliF |
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| ID | 4845025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4667424 |
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| End bp | 4669100 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640121243 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001052316 |
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| Protein GI | 126176167 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.697523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACCA CTTTTGTTCA ATCAGGTCAG GATATTACCG GGACTGAATC TTCGTCAGGA
TTCATTGCTG GCATGACCCA AAAATGGCAT CGTTTTAACC GTGGTGATCG TCAGGTCATA
GCATTAGCTT TACTCGCTGT GGTTGTAGCT AGTGTCATAG TGCTGATGTT ATGGACGGCA
ACGGCGGGTT ACCGACCTTT ATATGGTAGC CAAGAAAATG TTGATACTTC TCAGGTTTTA
AATGTTTTAG ATGCAGAAGG CATTGATTAT CGCCTCGATG CGAATTCTGG TGCTGTACTC
GTTGCAGAAG AGCAAGTGGG TAATGCTCGT ATGATCTTGG CCGCCAAAGG CGTTAAAGCT
AAGGTGCCTT CTGGCATGGA GGCTCTTGAT AATACCGCCC TCGGTACGAG CCAATTTATG
GAGCAAGCCA AATATCGCAA TAGCTTAGAA GGTGAATTGG CTCGAACCAT AATGTCGTTA
AAGTTAGTTC GTGCTGCAAG AGTTCATTTG GCGATACCTA AACAAACTCT GTTTATCCGT
CAGGAGCCTG AACTGCCTAC CGCTTCTGTG ATGTTGCAGT TAGATCCCAA TACTCGACTC
TCTGAGTCAC AGGTTGAGGC GATTGTTAAT TTAGTCGCAG GGAGTGTCAC TGGACTCACG
GCAAGTAATA TCAAGGTTGT CGATCAAGAT GGCCGATATT TAAGTGAGAA CATTTCAGGT
AATCAAGATC TTAGCCAGTC TAGGAATAAG CAATTACAGT ACACGCGTGA ACTTGAAAAT
AGTCTAGTGG CCAATGCCTC TTCTATGCTC GAGCCTGTGC TTGGGCAAGA AAACTTCCAA
GTACGGGTAA CGGCAAAAGT AAACTTTAAC CAAGTTGAAG AAACCAAGGA GTCACTCGAT
CCACAAAATG TCGTGACTCA AGAACGTACC AGTGTCGATG ATTCAAGCAA TAGTATTGCC
GCGGGTATTC CAGGAGCATT AAGTAATAAG CCACCCCAGG CAGGCAAAGC GGCAGCGGAT
GACAAAACCC GTAATTTGAA ACAGGAAGAA AGTCGTCAAT ATGACGTGGG TCGCTCTGTA
CGTCATGTCC GTTATCAACA AATGCAGCTC GAAAATCTCT CTGTCTCAGT GCTTATTAAT
AGTGCGACAA GCCAAGGAGC ATTCAATGAT GAGGCTCAAC TCGCTAAGTT TGGCAATATG
GTCAAGGATG CTATCGGTTT CTCGGCGGCG AGAGGTGATA GTTTTACCAT TAATGCCTTT
GAGTTTACCC CAACTGTTAC AGCGGAATTT ACGCCGTCAC CTTGGTGGCA ATCAGAAAAT
TACCAAGCTT ATTTACGCTA CATCATTGGC GGCATTCTCG GTTTCGGACT GATTTTGTTT
GTATTAAGGC CGCTGGTTAA GCACTTGACT CGTACAGCGC AAATGACTGC TCCTAGGATT
GAGCCCGTTG CATTAAGTGC AGCTCCTGCT GGCGCGTTAG ATGGACCTGT TGCCGATGCT
GCATCAAATC AGCCACATCA GTTACCGAGT GCCGAGTGGC TAGGTAGTCA AGGTTTACCC
GAACCTGGCT CACCTTTGAC CGTTAAAATG GAGCATTTGG CCTTGCTCGC AAATAAAGAA
CCCGCGCGTG TTGCAGAAGT GATAGCTCAT TGGATAGGCG ATAAAGACGG TGAATAA
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| Protein sequence | MSTTFVQSGQ DITGTESSSG FIAGMTQKWH RFNRGDRQVI ALALLAVVVA SVIVLMLWTA
TAGYRPLYGS QENVDTSQVL NVLDAEGIDY RLDANSGAVL VAEEQVGNAR MILAAKGVKA
KVPSGMEALD NTALGTSQFM EQAKYRNSLE GELARTIMSL KLVRAARVHL AIPKQTLFIR
QEPELPTASV MLQLDPNTRL SESQVEAIVN LVAGSVTGLT ASNIKVVDQD GRYLSENISG
NQDLSQSRNK QLQYTRELEN SLVANASSML EPVLGQENFQ VRVTAKVNFN QVEETKESLD
PQNVVTQERT SVDDSSNSIA AGIPGALSNK PPQAGKAAAD DKTRNLKQEE SRQYDVGRSV
RHVRYQQMQL ENLSVSVLIN SATSQGAFND EAQLAKFGNM VKDAIGFSAA RGDSFTINAF
EFTPTVTAEF TPSPWWQSEN YQAYLRYIIG GILGFGLILF VLRPLVKHLT RTAQMTAPRI
EPVALSAAPA GALDGPVADA ASNQPHQLPS AEWLGSQGLP EPGSPLTVKM EHLALLANKE
PARVAEVIAH WIGDKDGE
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