| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3958 |
|---|
| Symbol | |
|---|
| ID | 4845001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4650520 |
|---|
| End bp | 4651326 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640121222 |
|---|
| Product | flagellin domain-containing protein |
|---|
| Protein accession | YP_001052295 |
|---|
| Protein GI | 126176146 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGTG TTCATACTAA TTACGCTTCA ATTGTTGCGC AGGGTGCTGT AAATAAAAGT
AATAACCTAT TAACTAATGC TATGGAGCGT TTGTCTACTG GTTTACGTAT CAATAGCGCT
TCTGATGATG CTGCGGGTTT GCAAATTGCT AATCGCATGA GCGCTAACGT GAAAGGTATG
GAAACGGCTT CACGCAATAT TTCTGACGCG ACGTCTATGT TACAAACTGC CGATGGTGCG
TTAGAAGAAT TAACAACTAT TGCCAACCGC CAGAAAGAAT TGGCCACTCA AGCGGCGAAC
GGTGTGAACT CTGCTGATGA TTTAACTGCG CTGGATGCTG AATTTCAACA GCTAAGTTTA
GAAGTTGATC GTATCGCAAA AAATACGACT TATGCGGGTA ATAACTTGTT CACTGCTATA
GATGGTGGTG TGACTTTCCA AATTGGTGCT GGCACAAGCG AAACGATGAA AGTGACAAGT
GCAGCCCCAG TTGCGCTGGC CAATACTGTG AAACTGGATA CTGGCGATAA CGCAAGGTTA
GCAATTACCG CAGTTGATGA TTTTATTAAG ACAGTGGGCA CTTCACGCTC AACTTTAGGT
GCCAACATTA ACCGTCTTGG CCATACAGCG GCTAACCTTG CCAGTGTAAC TGAAAATACT
AAAGCCGCTG CTGGCCGTAT TATGGATGCC GATTTTGCGG TTGAATCTGC CAATATGACG
CGCAACCAAT TATTAGTTCA AGCGGGTACA ACGGTTCTGT CTTCAGCTAA CCAAAATACG
GGTTTAGTGA TGGGTCTACT GCGCTAA
|
|---|
| Protein sequence | MLGVHTNYAS IVAQGAVNKS NNLLTNAMER LSTGLRINSA SDDAAGLQIA NRMSANVKGM
ETASRNISDA TSMLQTADGA LEELTTIANR QKELATQAAN GVNSADDLTA LDAEFQQLSL
EVDRIAKNTT YAGNNLFTAI DGGVTFQIGA GTSETMKVTS AAPVALANTV KLDTGDNARL
AITAVDDFIK TVGTSRSTLG ANINRLGHTA ANLASVTENT KAAAGRIMDA DFAVESANMT
RNQLLVQAGT TVLSSANQNT GLVMGLLR
|
|---|
| |