Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3941 |
Symbol | |
ID | 4843755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4634592 |
End bp | 4637606 |
Gene Length | 3015 bp |
Protein Length | 1004 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640121207 |
Product | UvrD/REP helicase |
Protein accession | YP_001052280 |
Protein GI | 126176131 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCATTGA CTCACTCTGA ACAAGATATC AAGCACAGTT GGTTTGGCCA TTTCTTTATT GGCAAAGCTG ATGCGGTAAA ACTCAGCGCC TGTGGTATTA GCATTAATCG CACTAAAGGC GGCTTTTTTG CTCACTCTCG CAGCGCTAAT GAAGTTGCCG CTGACGAACA TTTTACTTGG CAGCAGCTCG ACTCCCCGCC GGTTTTTACC TTGAGTCCGC TCGGATACTT GCTCAGTTTC ACTGTATCTG GCAAAGCCTA TCAACTGCCG TTTCTAAGCT ATTTTGCGCA GCATCAATTT GGCAACGAAA TCGCACTGCT TTGGGCGAAT GCTAATGGGG CGCGCATTGC TGAGTTAGTG GCGAAAGTCG ATAAAATACT GGCACACACT TATTTACGTG AATCACGTTT AGCAATGATA CAAGCCAGAG TCGCGCGCGA ATATCAGCGT TGGTTCCCTT GGTGTGAAAA CCTGCCATTG TCTGCACATT TACACACAGT GTTAGTGAGG CTTAAGCAAA TCCACCGCTG GACCCGCGCC GATGTAAAGC ATCTGCGTGA AGATTACGTT CAGTCACAGC TCGTTAAATT TGCAGACTAT TTTGAGCATG TAGAATCTAA TCCCTTAACC GAAAAACAGC GCCGAGCTTG TATTATCGAT GATAACAATA ACTTATTATT GGCCGGTGCA GGCACGGGCA AAACCAGTGT GATGGTCGGG CGAGCCGGAT ATTTGCTGAA GAGTGGTCAA GCAAAAGCCG ATGACATATT GCTATTAGCC TATGGCCGTA AAGCAGCTGA CGAGATGGAT GAACGGATTA AAAACAAGCT TGGCACGGAG GATATCAAGG CGAGCACTTT CCACAGTTTA GGCTTAAAAA TTATCGCCGA CGTTGAGCGC GCTAAACCCA GTTTGTCCCC TTGGGCAGAG GATGACAAAG CCAAAGAGCT GTGGGTGCAC CATACCCTTG AGACTTTGAT TGAAGATGAG GCTTACCGTA AGCAGCTTTT CGAGTACTTC AGCCGCTTCT ATTATGTTGA AAAAAGCCCG TTCGAGTTCG AGGTGGAAGG TGAGTATTTT CAATACTTGA ATGATAACGA TATTCGCACC CTTAAAGGTG AGCGAGTCAA AAGCTTTGGT GAGCTCTACA TTGCCAACTG GCTATTTAGC AATGGCATTG AATATGTTTA TGAAGCTAAG TATGAGCATG ATGTGCGCAG TATTGATTTT CGTCAGTATC AACCCGATTT CTATCTGCCT GAATACCAAG TTTATCTTGA ATACTATGGT ATTGATGAAC ACCAGCATAC CGCCCCTTAT ATCGATAACC ATAGGTACTT GGAATCGATG GCATGGAAAC GCAAGCTACA TAAACAACAT GGTACTAAGT GTGTTGAACT ATTTTATTAC CAACATAAAA ACGGGTCGTT AATCGGTAAG CTTGAGCAAG CTTTACAGGT CTTTAAAGTG CAATACGCGC CCTTACCCGA TGAAGCCATA CTCGCCACCC TGCATGAACT AGGCCGCGTG ACTGAATTGG CAAAAATGTT TAGTCAGCTG ATTGGGCTGT ATAAAGCAGC TTGCCTTGAT GAACATGGCC TTGATGGGGT ATTTGCCCGC GCCGCCGATG CTCAGCAGAC CCGTAAGGCA TTCGAACTGC TTGAGCCCAT AATCACGCGC TATGAGCAAC ATTTAGCAAT AAATGGCGAC ATTGATTTTG AGGACATGAT TGGCAAAGCG CTGACGTATC TACAACGCGG GCAATTTATT AGCCCGTGGC GTTTTATTAT GGTGGATGAG TTCCAAGATA TTTCAGAACC ACGTGCCCGC TTAGTGCGTG CCTTGAGGGA TTCCTGTGCG CCCCATTCTA AAGCGCAGGC GTCTTTATTT TGTGTCGGGG ATGACTGGCA GGCGATTTAT CGCTTTAGCG GCGCAGATGT GAGTTTAACC ACGCAATTTA CTCACTATTT TGGCCCAACC GCCCGAAACG ACTTAGACCT GACTTTTAGG TTTAACAGCA GTATTGGGCA AGTCGCCACC CAGTTTGTCA CCCAAAATCC CACACAATTG AGCAAGGATA TTCGCTCCCT CACGCAGGTC ACCTCCCCCG CGGTTTCAAT ATTACGCCGC GGAGAAAATG AACCACCCAG TAAAGATGAA CCAAGCCCGA ATGCATTAGA ACAAGCATTA ACGGCGATAA GTGCAAGGAT AAGCGCCGGA AGTGACAAAC TTAACAGCGT ACCGAGCGTC TATTTGTTGG CACGTTTCTG GTTTCAGTTA CCCGATAAAA CCCAAGTTAA CCAACTTAAA ACTAAGTACC CCAACATGAA GATTGAGTGC CAATCTTTTC ATGCTTCGAA AGGGAAAGAA GCCGATTATG TGGTGATCAT GGGGATGAAG ACGGGAATGC ATGGCTTTCC GTCGATGAAA ATTACGCCGC CGATACTGGA TGCTTTTTTA CCTAAAACTG AAGCGTTTGA ATTTGCAGAA GAACGCCGAC TATTTTATGT CGCATTAACG CGGACAAAAC ACCGTGCCTA TGTGATTGCC GATATGACAG ATGTGAGTCC TTTCGTCACT GAACTGCTTA CAAAAGACTA CCCAATTGAA CAAGATGAGT TCAGCACCTC TTTAGTACAA AGGTTATTTA AAGAAGTAAA ATGCGTGCGT TGCAGCACGG GAATGCTTAA GCCTAGAACG GGAAATTTTA AATCGTTTTA TTCTTGCTCA CACTTTCCCT TGTGCGATCA CAAGGAGCAA GGCTGCGAAC TCTGCGCTAG CCCAATGACG CGTAACCATT TTGCAGGCTT TAAGGTGTGC CTAAATGAGG CTTGTGGACA TATATCACCG CTTTGTAACC TCTGCGGCGG CGATATGCAG TTGAAAGATG GTCGATTCGG CCCCTTTTGG GCCTGTCGCA ATTACCGCGG GCAAAACCTA CCCAGTTGTA CGAATACACT AAACAAGGCC AAGTTATCGA TCCCAAGCGA GCGACCCCAA AAGCATGTGA GTTAG
|
Protein sequence | MSLTHSEQDI KHSWFGHFFI GKADAVKLSA CGISINRTKG GFFAHSRSAN EVAADEHFTW QQLDSPPVFT LSPLGYLLSF TVSGKAYQLP FLSYFAQHQF GNEIALLWAN ANGARIAELV AKVDKILAHT YLRESRLAMI QARVAREYQR WFPWCENLPL SAHLHTVLVR LKQIHRWTRA DVKHLREDYV QSQLVKFADY FEHVESNPLT EKQRRACIID DNNNLLLAGA GTGKTSVMVG RAGYLLKSGQ AKADDILLLA YGRKAADEMD ERIKNKLGTE DIKASTFHSL GLKIIADVER AKPSLSPWAE DDKAKELWVH HTLETLIEDE AYRKQLFEYF SRFYYVEKSP FEFEVEGEYF QYLNDNDIRT LKGERVKSFG ELYIANWLFS NGIEYVYEAK YEHDVRSIDF RQYQPDFYLP EYQVYLEYYG IDEHQHTAPY IDNHRYLESM AWKRKLHKQH GTKCVELFYY QHKNGSLIGK LEQALQVFKV QYAPLPDEAI LATLHELGRV TELAKMFSQL IGLYKAACLD EHGLDGVFAR AADAQQTRKA FELLEPIITR YEQHLAINGD IDFEDMIGKA LTYLQRGQFI SPWRFIMVDE FQDISEPRAR LVRALRDSCA PHSKAQASLF CVGDDWQAIY RFSGADVSLT TQFTHYFGPT ARNDLDLTFR FNSSIGQVAT QFVTQNPTQL SKDIRSLTQV TSPAVSILRR GENEPPSKDE PSPNALEQAL TAISARISAG SDKLNSVPSV YLLARFWFQL PDKTQVNQLK TKYPNMKIEC QSFHASKGKE ADYVVIMGMK TGMHGFPSMK ITPPILDAFL PKTEAFEFAE ERRLFYVALT RTKHRAYVIA DMTDVSPFVT ELLTKDYPIE QDEFSTSLVQ RLFKEVKCVR CSTGMLKPRT GNFKSFYSCS HFPLCDHKEQ GCELCASPMT RNHFAGFKVC LNEACGHISP LCNLCGGDMQ LKDGRFGPFW ACRNYRGQNL PSCTNTLNKA KLSIPSERPQ KHVS
|
| |