| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3920 |
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| Symbol | |
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| ID | 4844141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 4615274 |
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| End bp | 4616542 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640121186 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001052259 |
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| Protein GI | 126176110 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACGG CAACGACTAC AAGAAAGTCT CGTACCAAGA AAACCGAGCA AAAGAGCCAA
CCAAAAATTT ATACCTTTGA ATGGAAAGGC CTAAATCGCG ACGGTAAGAA AACTGCGGGA
GAGCTAAGAG GTGCAACTGC CGCCGAAATC CGTAGTCAGT TAAAATCCCA AGGAGTGAAC
CCTAAGAGCG TTCGTAAGCA GTCATCAGCA CTATTTAAGT TAGGTGATCC GAAAATCACC
CCTATGGATA TTGCTGTAAT TACTCGCCAA ATTGCGACTA TGCTAGCAGC GGGCGTACCT
TTAGTAACCA CAATTGAACT ACTCGGCCGC GGTCACGAAA AAGCTAAGGT GCGAGAACTA
TTAGGAAATA TCCTCAGCGA AATTCAATCA GGGATTCCCT TATCCGATGC AATGCGCCCC
CATAGGCGTT ACTTCGATGA ACTTTATGTC GACCTAGTCG CTGCAGGCGA GCACTCTGGC
TCACTAGATT TGGTTTTTGA CCGCGTTGCT ACTTACAGAG AAAAATCAGA AGCACTGAAG
TCCAAAATTA AGAAGGCCAT GTTCTATCCT GCTGCAGTTG TCATAGTCGC AATCTTAGTC
ACATCCTTAT TACTATTGTT TGTGGTGCCT CAATTTGAAG AAATTTTTAA GGGCTTTGGT
GCTGAACTGC CCGCCTTTAC CCAACTGGTG CTGCATATTT CCCGCGGCTT ACAATCCTCT
TGGTATATCT TTTTAGCCGC CATTATCGGC GGAGTATTTT TGTTTGTACG GGCGCACCGA
AACTCACAAA TAGTGCGAGA TAGAGTCGAT GAAGCTGTGC TTAAAATCCC CGCTATTGGG
TCTATATTAC ACAAAGGTGC CATGGCACGA TTCGCTCGGA CTTTAGCTAC TACCTTCGCC
GCGGGCGTGC CGTTAATTGA TGGTCTCGAG TCTGCCGCCG GCGCATCGGG TAATGCGGTA
TACCGCAAAG CCATTTTAAA AATCCGTCAA GAAGTGATGG CGGGGATGCA GATGAATGTG
GCGATGCAAA CCACAGGCCT GTTCCCCGAT ATGTTAGTGC AAATGGTGAT GATAGGCGAA
GAATCAGGCT CACTAGATAA CATGCTCAAT AAAGTATCAA CCATCTACGA AATGCAAGTA
GATGATGCGG TTGATGGCTT ATCAAGCCTG ATAGAACCGA TTATGATGGT GGTCATAGGT
ACTGTCGTTG GTGGCCTAAT TGTTGCTATG TATTTGCCCA TCTTCCAAAT GGGTAAAATC
GTCAGCTAA
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| Protein sequence | MATATTTRKS RTKKTEQKSQ PKIYTFEWKG LNRDGKKTAG ELRGATAAEI RSQLKSQGVN
PKSVRKQSSA LFKLGDPKIT PMDIAVITRQ IATMLAAGVP LVTTIELLGR GHEKAKVREL
LGNILSEIQS GIPLSDAMRP HRRYFDELYV DLVAAGEHSG SLDLVFDRVA TYREKSEALK
SKIKKAMFYP AAVVIVAILV TSLLLLFVVP QFEEIFKGFG AELPAFTQLV LHISRGLQSS
WYIFLAAIIG GVFLFVRAHR NSQIVRDRVD EAVLKIPAIG SILHKGAMAR FARTLATTFA
AGVPLIDGLE SAAGASGNAV YRKAILKIRQ EVMAGMQMNV AMQTTGLFPD MLVQMVMIGE
ESGSLDNMLN KVSTIYEMQV DDAVDGLSSL IEPIMMVVIG TVVGGLIVAM YLPIFQMGKI
VS
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