Gene Sbal_3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3918 
Symbol 
ID4844139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4612907 
End bp4613338 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content44% 
IMG OID640121184 
Productmethylation site containing protein 
Protein accessionYP_001052257 
Protein GI126176108 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000265425 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCCA TGAATTTAAA GAAAAAAGCT CAGGGTTTTA CTCTGATCGA ATTAATGATC 
GTAGTCGCCA TTATCGGTAT TTTGGCCGCT GTCGCACTAC CAGCGTATCG TGACTATGTA
GCCGCATCAC ATGGAGGTGC AGCGATGAAA GGTGTTAGTT CATATACATC AAAAGCTGTT
GCATGTGTTC AATCAGGTAT CGGTTGTGCT TCTATTGATG CAGATGTAGC GGCTGTCGCT
GGTTTAACCG CAGGGGCTGC TTTTGCAGAA GCAACAGACA ATACATTAGC ATACACTGAT
GGAACATGTG TTATTACTGC CACAATTACT TCAGCTGGTA CTGTAAGCTA TGCTGCAACT
CAAGGAGCTG ATGCAGGTTC AACTACAGCA GAACAATGCG CTAAAGGTGC CGGTAAATTA
GTAACATACT AA
 
Protein sequence
MKAMNLKKKA QGFTLIELMI VVAIIGILAA VALPAYRDYV AASHGGAAMK GVSSYTSKAV 
ACVQSGIGCA SIDADVAAVA GLTAGAAFAE ATDNTLAYTD GTCVITATIT SAGTVSYAAT
QGADAGSTTA EQCAKGAGKL VTY