Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3918 |
Symbol | |
ID | 4844139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4612907 |
End bp | 4613338 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640121184 |
Product | methylation site containing protein |
Protein accession | YP_001052257 |
Protein GI | 126176108 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000265425 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCCA TGAATTTAAA GAAAAAAGCT CAGGGTTTTA CTCTGATCGA ATTAATGATC GTAGTCGCCA TTATCGGTAT TTTGGCCGCT GTCGCACTAC CAGCGTATCG TGACTATGTA GCCGCATCAC ATGGAGGTGC AGCGATGAAA GGTGTTAGTT CATATACATC AAAAGCTGTT GCATGTGTTC AATCAGGTAT CGGTTGTGCT TCTATTGATG CAGATGTAGC GGCTGTCGCT GGTTTAACCG CAGGGGCTGC TTTTGCAGAA GCAACAGACA ATACATTAGC ATACACTGAT GGAACATGTG TTATTACTGC CACAATTACT TCAGCTGGTA CTGTAAGCTA TGCTGCAACT CAAGGAGCTG ATGCAGGTTC AACTACAGCA GAACAATGCG CTAAAGGTGC CGGTAAATTA GTAACATACT AA
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Protein sequence | MKAMNLKKKA QGFTLIELMI VVAIIGILAA VALPAYRDYV AASHGGAAMK GVSSYTSKAV ACVQSGIGCA SIDADVAAVA GLTAGAAFAE ATDNTLAYTD GTCVITATIT SAGTVSYAAT QGADAGSTTA EQCAKGAGKL VTY
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