| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3912 |
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| Symbol | |
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| ID | 4844133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4603541 |
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| End bp | 4605532 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640121178 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001052251 |
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| Protein GI | 126176102 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00272212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAT TAAAAGAAGT TTTTGTTCCT GATATCGGCG GCGATGAAGT GCAAGTGATC
GAAATTTGTG TGGCTGTGGG TGATACCCTA GCGGCAGAAG AATCGATTCT TACCGTCGAA
AGCGACAAGG CGACTATGGA TATTCCAGCG CCTTTCGCCG GTGTTTTAGC CGAATTGAAA
GTGGCTGTGG GCGATAAAGT ATCTGAAGGT ACTTTGATTG CTATGATGCA AGCAGCGGGC
GCGGCAGCTG CTGCTCCGGC TCCAGTTGCA GCACCCGCTC AGGCGGCACC AGCATCTGCA
CCAGTTCAAG CGGCTCCTGC CCCAGTGGCT GCTGCGACGG GCGCAACCAA AGTGGTTGAA
GTGACTGTAC CTGATATCGG TGGCGACACT GATGTGTCGG TTATCGAAGT CCTGGTTGCT
GTTGGTGACA AGATTGAAGT TGATAGCGGT TTAATTACCC TAGAAACAGA CAAAGCGACC
ATGGACGTAC CATCACCTTT CGCGGGTGTG GTTAAAGACG TTAAAGTCGC AGTTGGCGAT
AAAGTGTCGC AAGGCTCTTT AGTCATCATG CTTGAAGTGG GCGGCGCTGC ACCTGTAGCC
GCGCCAACTG TTGCTGCCCA AGCGGCTCCT GCCGCTACGG TAACGCCAGT GGCCGCAGCA
CCTGCTGCAC CAGCGGCAAG TGTGGTTGCG GTAAAAGAAA TTCAAGTGCC GGATATTGGC
GATGCCAGCA ATGTCGATGT GATCGAAGTG CTCGTGTCTG TTGGTGATGA AATCACTGCT
GACCAAGGTT TGATTACCCT TGAAACTGAC AAAGCCACCA TGGAAGTGCC TGCGCCATTC
GCCGGTAAAC TGCTGTCTTT GACTGTTAAA GTGGGTGACA AGGTTTCTCA AGGTAGCGTT
ATTGCGACGA TTGAAACTGT GACTGCAGGT GCAGCTCCTG CGCCTGTTGC TCAAGCGGCA
GCTCCTGCTC CAGTGAGCGC GGCGCCCATT GCAGCCCCAA CACCTGCAAG CCGTCCTCCA
GTGCCACACC ACCCAAGCGC AGGTACGCCT GTGTCTACCG GTGCGGTACA TGCGTCTCCT
GCGGTACGTC GTTTAGCCCG TGAATTTGGT GTCGACTTGA CCCAAGTTGC TGGTACTGGC
CGTAAAGGTC GCATCATGAA AGAAGACGTA CAGGCGTATG TGAAATACGA ACTGTCTCGT
CCGAAAGCGA CTGCGGCAAC CTCTGTTGGT TCAGGTAACG GCGGCGGTCT GCAAGTGATT
GCAGCACCTA AAGTTGATTT CAGTAAGTTT GGTGAAGTGG AAGAGATTCC ATTAAGCCGT
ATCCAGAAGA TTTCAGGTCC TAACTTACAC CGCAACTGGG TAACTATCCC TCACGTGACT
CAGTTCGATG AAGCTGATAT CACTGAAATG GAAGAGTTCC GTAAGCAGCA AAACGATGTA
GCGGCGAAGA AAAAAGCCGA TTACAAGATC ACGCCTTTAG TGTTTATGCT AAAAGCTGTG
GCTAAAACGT TGCAACAGTT CCCAGTGTTC AACTCAAGCT TAAGTAGCGA TGGCGAATCA
CTGATCCAGA AGAAGTATTT CCATATCGGT GTGGCGGTAG ATACGCCAAA CGGTTTGGTT
GTGCCAGTCG TGCGTGACGT GGATAAGAAA GGCATTATCG AGTTATCTCG TGAACTGGCT
GATATCTCTA TCCGTGCCCG TGATGGCAAG CTGAAATCTG CTGACATGCA AGGTAGCTGT
TTTACTATTT CAAGTTTAGG TGGCATTGGC GGTACAGCGT TTACGCCTAT CGTTAACTAC
CCAGACGTGG CGATTTTAGG TGTGTCTAAA TCTGAAATTA AGCCTAAGTG GAATGGTAAA
GAGTTCGAAC CTAAATTGAT GTTGCCATTG TCGCTGTCAT ACGATCACCG CGTGATCGAT
GGTGCTATGG CTGCACGCTT TAGTGTGACG CTGTCAGGAA TTCTGTCCGA TATTCGTACT
TTGGTTCTGT AA
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| Protein sequence | MAELKEVFVP DIGGDEVQVI EICVAVGDTL AAEESILTVE SDKATMDIPA PFAGVLAELK
VAVGDKVSEG TLIAMMQAAG AAAAAPAPVA APAQAAPASA PVQAAPAPVA AATGATKVVE
VTVPDIGGDT DVSVIEVLVA VGDKIEVDSG LITLETDKAT MDVPSPFAGV VKDVKVAVGD
KVSQGSLVIM LEVGGAAPVA APTVAAQAAP AATVTPVAAA PAAPAASVVA VKEIQVPDIG
DASNVDVIEV LVSVGDEITA DQGLITLETD KATMEVPAPF AGKLLSLTVK VGDKVSQGSV
IATIETVTAG AAPAPVAQAA APAPVSAAPI AAPTPASRPP VPHHPSAGTP VSTGAVHASP
AVRRLAREFG VDLTQVAGTG RKGRIMKEDV QAYVKYELSR PKATAATSVG SGNGGGLQVI
AAPKVDFSKF GEVEEIPLSR IQKISGPNLH RNWVTIPHVT QFDEADITEM EEFRKQQNDV
AAKKKADYKI TPLVFMLKAV AKTLQQFPVF NSSLSSDGES LIQKKYFHIG VAVDTPNGLV
VPVVRDVDKK GIIELSRELA DISIRARDGK LKSADMQGSC FTISSLGGIG GTAFTPIVNY
PDVAILGVSK SEIKPKWNGK EFEPKLMLPL SLSYDHRVID GAMAARFSVT LSGILSDIRT
LVL
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