| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3910 |
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| Symbol | |
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| ID | 4844131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4597078 |
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| End bp | 4601571 |
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| Gene Length | 4494 bp |
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| Protein Length | 1497 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640121176 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001052249 |
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| Protein GI | 126176100 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGAAG TAAGCCGTCA CATGCAAACA AAAATAATTA GAACAATTCT GACATGTTTC
ATCCTTTCAC TGACTTGCGT CCACTCGGCT TGGGCGGGCG GTTTTGTGCA GCGAGTTTTT
ACTGATAGGG ACGGTTTAGC GGTCACCAGT ATCCGAGGCT TGGCCTTAGA TGATTACGGT
TTTGTATGGG CCGCGACTGA GCAGGGCTTG TATCGAGTCA GTAATTCTAA GGTGCGGCGT
ATCGATAAAA TCGGCACCGA ATCGCGACTG TCAGATGACT TTTTAACCTC AGTAGTAAAC
ATCGACCGTG ACAAGTTATT GGTTAGCACT AACGCCGCAA TTTACCTCTA CGATATTGTC
CAAAATCAAT TTACCGCGTT TGGTTCTCCC TATTTATTCC CGCAGTTTCC CGGTGGTGCG
CTGGTCTCGG CAGCCCGAAA GAATAGTAAA ACATGGCGAT TATTAATTGA TAATGGCCAG
ATATATGAAT TCTCCCCTTC AAAGTCCGAA CTGCGCCTCA TTACTCAGTT GCCGGTTAAT
CGCGATCTTC CTTGGCGCAA ATTGCTGGTC ATGCCTAACG GTCAAATGCT GGTCGCGGGA
ACCTTGCAAT TAGAGTTGCT GGAGCAAAAT GGCGAGCGGG TGTTCCAATA CTCTTGGACT
GAATCTATGG GCAGTATTCT CGATATGTTA GAGGATTCTC AGCATAGGAT CTGGATTGCG
ACCGGACGCG GCGTTTATCA ATTAGATCAA ATTTCTAGGC AAATTACCCC CGTGCCAGAA
TTGCCCGATT GGAGCACAGT GATCATTGAG GATGCTAAAG GGGATCTGTG GTTTTCCAGT
CGCATCGGTT TATTGAAATG GTCGCCCGAA ACGCGGCAGA TTGAAAACTA TCAAAAAGAG
TTGAAGGCTG AGGCCAACAT GGAAACGCTG AAAGCCATAT TGTTTGATGA TGCAGGTTTG
ATGTGGGTCG GAGGCTCAGG CGATGGATTG GCTTTATTGG CGTCACAGCC TGATTTCATC
CTCGATACTT ATACTGGCGA TGCACCCTAT CAACTGAGCG ATGCCATGAC TTGGTCAGTA
CATGCCAGTG ATGAAGGGGT TTGGTTAGGT TCTTCCAGTT TAGATTTTAT TGCAAAAGGC
AGTAGCAAAG CGTTTAACGT GCCAATTGAG GGATTTAATC CCCATGAAAG TATTTACGAT
ATCAGTGCGT TTGAGGGGCA TTATTTACTG TTATCGACGA CCAGCGGCCT CTTTGTTGTC
GATAAAGACA CTTTGCAAGG CAGTAGCTTT TCTAAATGGA CTCACGGCAA TGATGATTTT
AAAAATAAGC TTATTTATAA AACCTATCGT GACCCCAAAC TGAAAGGACG TGTTTGGATT
GCGACGACAA CAGGGCTGTA TTTTTGGGAA ATGGGACTGT ACGAACCTCA GCCCTTTGAT
ATTGATAAGT CATCGAACAA GTTTGACGGC CCTAAGCGCC CCGTGATCCG CACTATTTAT
CGCACCTCCG ACGGTCGTTT GTGGGTGGGC GGTAAAAAAG TCTTTGGTTA CATCGACAGC
CAAAATGAGT TTCATGATCA GCGGCAGTTG TTTAATGCTT TTGCTGCACA ACCCACGGTC
AGTCACATTG AAGAAATGTC ACCTGGGGTG ATCTGGTTTG GCTCCTATGA AAAAGGTTTA
TTTGAATACC ATCAGCAAAC GGGATCGTTA ATTTCACTGA CCTCCGAGTG GCAATTAAAT
TGTAGTTCAG TGTTTTTTAT TCAAAAAACG CCCAAGTCTA ATCTTGTGGG CTGCTCGGAT
TCTTTGGTGC GACAGGATAT CCAAACGGGC GAGATTGCTA TGTTTAATCA ACTCGATGGT
TTAATTTCCG ATGAGATGAA CGAAGGCGCC TATTTTTACT CACCTAAAAC AGGCTTTTAC
TTAGGCACGC CCGAGGGCGT GATGCGACTT GATGTCGATA GGCTGGCCAA TCGCATTACC
GATGACCATG TGATGCTTGA ATCTGTCTCT GTGTACTATA ACAACACGAC CGAAGTGTCC
CTGTTGCCGC GTAACATGAT GACCATAAAA CCCGAAGCCA ATATGGTCAG TTTTCAAATC
ACTAACTTAG ATTATCTCGA TGATTCGCCC ATCCAATTTA AATACCGATT ACGTTATCAA
GATGAAGAGA GTAATTATGT GCTGCTTCAG GGGGAGTCGC AGATTAACCT CGCAGGTTTA
GCTGCGGGTG GTTATGTTTT AGATATTTTA AGTCAGATCA ATGGAATATG GTCCGATAAA
CCTTTTAACT ATCCCTTTTA TGTTGAGCAG CATTGGTGGT TATCCCAAGG TTTTAAAGGC
ATTTTACTGC TGTTATTTTC TATTATTGCC TTAAGTCTTG CTTGGTATCG GCAACGTCAG
ATCAATACCT TTAAGCAGAT GAATCAGGCA TTAACTGAGA GTGATGACAG GCTGAGGCAA
TCTTTGCGCG GTAGTGACTC GGATCTCTGG GAATGGCATA AAAATACTCA GGCATTTCAT
CTTGATAATC GCGGTGCCGT TCTCGGTACC CATGCCAATG AGATTGTTGT GAGCTTAGCA
GAGTTGCCTG TGCATCCACA GGATAGGGAA AAAGCGCTCG CTCAGTGGGA TAGTATGATA
TCGGGGGAGA TAGACAGATT CGAAGCCGAA TATCGCTATC AGCGCAAGGA CGGTAATTGG
GGCTGGTTAA GGGTAAGAGG GCGGCCCGTT ACCCGTAATA AGCACTCCAA TGAGATTGAG
CGGGTCGCGG GTATTTATAG TGATATTACC GTGCAACGCC AGTTAGAAGA TGAAGTGAAT
TTACTGGCAA AAGCGTTTGG TAACACATCT GAAGGTGTAC TTATTTTAGA TGTCGAAGGC
AGTATTCGCG TAGCGAATTA CGCGGCACAG CAAATTATCG GCATCGATTC TGCTGACTTA
GTTGGCCAAT CTTTTACCCA ATTTGTACAG ATGAATGACG GTTTGGCATC GGAAATCAAG
CAACTCCTCA GTGATAGCCA GTCTTGGACG GGCGAGCGTG AGTTAATCAA CGCCAGTCAG
CAACCTTGCC CTGTGTGGCT AAACGTATCT GTGATGCAAA GTGCCAACGG GAAAGTGACC
CATTATGTGG TGGTATTCTC GGATATTACC GAACGTAAAC GAACCGAAGC CGATTTACGC
CGCCTAGCCA ATTACGATGT ACTTACGGGA TTGCCAAACC GCTCCTTATT TTCTAGTCGC
CTATTACAGT CTATTCAGGC CGCGCAGCAA ACGGGCGAGA AATTGGCGCT ATTGTTCTTG
GATCTCGATA GATTTAAGCA TGTTAATGAC TCCTATGGTC ATAGCATGGG CGATGCCTTG
CTGGTTGAAG CCTCAAGCCG ACTTCAATCC TGTATTGCTA GCGAGCATAT GCTCTGCCGC
TTTGGCGGCG ATGAATTTGT GATTTTACTC AGAAATGCCA ACAGCATTGA TGATATCAAC
CACATTGCCG AGCGGCTGCT GGAACAAATC GTGGCGCCTT TTAAGTTATA TGGCCGTGAG
TTTTATATTT CGACCAGCAT TGGCATCAGT ATTTGGCCCG ACTATGCGGT TCAGCCTGAA
GCCTTTATCA AGAATGCCGA TCTCGCTATG TACCACGCCA AAGAAGAAGG GCGGGGGAAT
TTCCAATATT ATTCCTCTGA GCGTAATGCC CAAGCCCTCT ATCATTTACG GCTTGAGGCC
GATTTACGTA AAGCCATAGA GCGGCAAGAG TTCGAGCTTT ATTACCAGCC GCAGATTGAT
ATTTTACGTA ACGATAAGCT CATTGGAATG GAAGCATTAA TTCGCTGGAA ACATCCGTTG
GACGGCTTTA TTCGTCCCGA TATTTTCATC AAAGTCGCCG AGGCCTGCGG TTTAATTGTC
GATATTGACC GCTGGGTATT AAGGCAGGCC TGTGTGCAGG GAGCCCATTG GGCGAAACGT
TATGGCGCTA CCTTTAAGTT GTCGGTTAAT ATTTCGGCGG TGCATTTCAG GCAGCCCGAT
TTTATTGAAG ACATACAAAG AATTCTGCAT GAAACCCAAA TGCCGACAGC GTCTTTAGGC
TTAGAAATCA CTGAAGGCGT ATTGATGAAA GAGCTGCACG TTGCTAAAGA TCATCTCTCG
CGATTGAAAT CCTTGGGGAT TGAAGTTGCC ATTGATGACT TTGGGACGGG TTATTCTTCT
CTGGCTTATT TACGCCATTT TGAGGTGAAT ACCTTAAAAA TCGATCGCTC CTTCTTGATT
GATATCGCCA CCAATAAGGC CGATCAGGCG ATTGTGAGCA GTATTATTGA ATTAGCCCGT
AACCTTAAAT TAAATGTGGT TGCCGAAGGG ATTGAGACGG TCGAGCAGTT AGAGCAAGTA
TTTAGCCGCG GCTGTTATAT TATTCAAGGG TATTATTTTG CTAAGCCTAT GTGCGTGGCT
GATTTTGAAC GCTATTTAGA AACAGATAAC AGAGTCGTTG CTATTGAGCA TTAA
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| Protein sequence | MYEVSRHMQT KIIRTILTCF ILSLTCVHSA WAGGFVQRVF TDRDGLAVTS IRGLALDDYG
FVWAATEQGL YRVSNSKVRR IDKIGTESRL SDDFLTSVVN IDRDKLLVST NAAIYLYDIV
QNQFTAFGSP YLFPQFPGGA LVSAARKNSK TWRLLIDNGQ IYEFSPSKSE LRLITQLPVN
RDLPWRKLLV MPNGQMLVAG TLQLELLEQN GERVFQYSWT ESMGSILDML EDSQHRIWIA
TGRGVYQLDQ ISRQITPVPE LPDWSTVIIE DAKGDLWFSS RIGLLKWSPE TRQIENYQKE
LKAEANMETL KAILFDDAGL MWVGGSGDGL ALLASQPDFI LDTYTGDAPY QLSDAMTWSV
HASDEGVWLG SSSLDFIAKG SSKAFNVPIE GFNPHESIYD ISAFEGHYLL LSTTSGLFVV
DKDTLQGSSF SKWTHGNDDF KNKLIYKTYR DPKLKGRVWI ATTTGLYFWE MGLYEPQPFD
IDKSSNKFDG PKRPVIRTIY RTSDGRLWVG GKKVFGYIDS QNEFHDQRQL FNAFAAQPTV
SHIEEMSPGV IWFGSYEKGL FEYHQQTGSL ISLTSEWQLN CSSVFFIQKT PKSNLVGCSD
SLVRQDIQTG EIAMFNQLDG LISDEMNEGA YFYSPKTGFY LGTPEGVMRL DVDRLANRIT
DDHVMLESVS VYYNNTTEVS LLPRNMMTIK PEANMVSFQI TNLDYLDDSP IQFKYRLRYQ
DEESNYVLLQ GESQINLAGL AAGGYVLDIL SQINGIWSDK PFNYPFYVEQ HWWLSQGFKG
ILLLLFSIIA LSLAWYRQRQ INTFKQMNQA LTESDDRLRQ SLRGSDSDLW EWHKNTQAFH
LDNRGAVLGT HANEIVVSLA ELPVHPQDRE KALAQWDSMI SGEIDRFEAE YRYQRKDGNW
GWLRVRGRPV TRNKHSNEIE RVAGIYSDIT VQRQLEDEVN LLAKAFGNTS EGVLILDVEG
SIRVANYAAQ QIIGIDSADL VGQSFTQFVQ MNDGLASEIK QLLSDSQSWT GERELINASQ
QPCPVWLNVS VMQSANGKVT HYVVVFSDIT ERKRTEADLR RLANYDVLTG LPNRSLFSSR
LLQSIQAAQQ TGEKLALLFL DLDRFKHVND SYGHSMGDAL LVEASSRLQS CIASEHMLCR
FGGDEFVILL RNANSIDDIN HIAERLLEQI VAPFKLYGRE FYISTSIGIS IWPDYAVQPE
AFIKNADLAM YHAKEEGRGN FQYYSSERNA QALYHLRLEA DLRKAIERQE FELYYQPQID
ILRNDKLIGM EALIRWKHPL DGFIRPDIFI KVAEACGLIV DIDRWVLRQA CVQGAHWAKR
YGATFKLSVN ISAVHFRQPD FIEDIQRILH ETQMPTASLG LEITEGVLMK ELHVAKDHLS
RLKSLGIEVA IDDFGTGYSS LAYLRHFEVN TLKIDRSFLI DIATNKADQA IVSSIIELAR
NLKLNVVAEG IETVEQLEQV FSRGCYIIQG YYFAKPMCVA DFERYLETDN RVVAIEH
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